EnhancerDB
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  3. rs9427732[chr1:202072200]
Enhancers that have rs9427732[chr1:202072200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202068088 202086155 enh12535
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs9427732[chr1:202072200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202071456 202072466 TCF7L2 GTRD no Colon (HCT116) 21367092
chr1 202071997 202073029 ZNF274 GTRD no Cervix (HeLa-S3) 21367093
chr1 202072002 202073099 ZNF143 GTRD no Epithelial (MCF-7) 21367094
chr1 202072072 202073168 ZNF143 GTRD no Epithelial (MCF-7) 21367095
chr1 202072084 202072542 ZNF143 GTRD no Epithelial (MCF-7) 21367096
chr1 202072103 202073033 ZNF274 GTRD no Cervix (HeLa-S3) 21367097
chr1 202072120 202072539 ZNF143 GTRD no Epithelial (MCF-7) 21367098
chr1 202072134 202072929 ZNF274 GTRD no Cervix (HeLa-S3) 21367099
chr1 202072137 202072916 ZNF274 GTRD no Cervix (HeLa-S3) 21367100
chr1 202072142 202072870 ZNF274 GTRD no Cervix (HeLa-S3) 21367101
chr1 202072148 202073154 ZNF143 GTRD no Epithelial (MCF-7) 21367102
chr1 202072153 202072683 TCF7L2 GTRD no Colon (HCT116) 21367103
chr1 202072155 202073096 ZNF143 GTRD no Epithelial (MCF-7) 21367104
chr1 202072163 202072924 ZNF143 GTRD no Epithelial (MCF-7) 21367105
chr1 202072169 202072532 ZNF143 GTRD no Epithelial (MCF-7) 21367106
chr1 202072195 202072821 ZNF274 GTRD no Cervix (HeLa-S3) 21367107
chr1 202072196 202072213 RXRA JASPAR yes 34553824
chr1 202072197 202072203 ZNF354C JASPAR yes 34553825
Genes associated with rs9427732[chr1:202072200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More