EnhancerDB
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  3. rs9471517[chr6:12341753]
Enhancers that have rs9471517[chr6:12341753]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs9471517[chr6:12341753]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12341743 12341755 TAL1 JASPAR yes 99962976
chr6 12341744 12341754 MAX JASPAR yes 99962977
chr6 12341751 12341762 FOXA1 JASPAR yes 99962978
chr6 12341751 12341766 FOXA1 JASPAR yes 99962979
chr6 12341752 12341763 FOXB1 JASPAR yes 99962980
chr6 12341752 12341763 FOXC1 JASPAR yes 99962981
chr6 12341752 12341764 FOXC2 JASPAR yes 99962982
chr6 12341753 12341764 FOXP2 JASPAR yes 99962983
Genes associated with rs9471517[chr6:12341753], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More