EnhancerDB
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  3. rs9477215[chr6:16771473]
Enhancers that have rs9477215[chr6:16771473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16764485 16776915 enh38835
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Blood (T-cell) Heart
Transcript factors that have rs9477215[chr6:16771473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16771149 16771474 ZNF263 UCSC Txn Factor no Conserved 108538919
chr6 16771185 16771588 CTCF UCSC Txn Factor no Conserved 108538920
chr6 16771238 16771502 RAD21 UCSC Txn Factor no Conserved 108538921
chr6 16771245 16771523 SMC3 UCSC Txn Factor no Conserved 108538922
chr6 16771467 16771478 PHOX2A JASPAR yes 100338133
chr6 16771467 16771478 PROP1 JASPAR yes 100338134
chr6 16771471 16771482 PHOX2A JASPAR yes 100338135
chr6 16771471 16771482 PROP1 JASPAR yes 100338136
chr6 16771472 16771482 PAX3 JASPAR yes 100338137
chr6 16771472 16771482 PAX7 JASPAR yes 100338138
Genes associated with rs9477215[chr6:16771473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More