EnhancerDB
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Enhancers that have rs949391[chr12:52675098]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52669305 52679150 enh14728
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs949391[chr12:52675098]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52673448 52675850 POLR2A UCSC Txn Factor no Conserved 108033834
chr12 52673448 52675850 POLR2A UCSC Txn Factor no Conserved 108033835
chr12 52673893 52675243 EP300 UCSC Txn Factor no Conserved 108033839
chr12 52673893 52675243 EP300 UCSC Txn Factor no Conserved 108033840
chr12 52673893 52675243 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033841
chr12 52673893 52675243 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033842
chr12 52673965 52675263 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546903
chr12 52673965 52675263 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033844
chr12 52673965 52675263 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033845
chr12 52673977 52675174 TCF12 UCSC Txn Factor no Conserved 108033846
chr12 52673977 52675174 TCF12 UCSC Txn Factor no Conserved 108033847
chr12 52673977 52675174 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033848
chr12 52673977 52675174 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033849
chr12 52674048 52675273 TCF7L2 UCSC Txn Factor no Conserved 108033864
chr12 52674048 52675273 TCF7L2 UCSC Txn Factor no Conserved 108033865
chr12 52674312 52675566 ZNF274 GTRD no Bone Marrow (K562) 21546938
chr12 52674312 52675566 ZNF274 GTRD no Bone Marrow (K562) 108033912
chr12 52674312 52675566 ZNF274 GTRD no Bone Marrow (K562) 108033913
chr12 52674549 52675125 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546945
chr12 52674549 52675125 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033932
chr12 52674638 52675108 ZNF143 GTRD no Epithelial (MCF-7) 21546951
chr12 52674638 52675108 ZNF143 GTRD no Epithelial (MCF-7) 108033942
chr12 52674662 52675106 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108033945
chr12 52674677 52675273 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21546954
chr12 52674677 52675273 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108033947
chr12 52674678 52675148 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21546955
chr12 52674678 52675148 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108033948
chr12 52674717 52675113 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546959
chr12 52674717 52675113 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033953
chr12 52674724 52675108 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546961
chr12 52674724 52675108 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033955
chr12 52674734 52675104 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546962
chr12 52674734 52675104 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033956
chr12 52674749 52675205 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546965
chr12 52674749 52675205 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033959
chr12 52674756 52675220 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546966
chr12 52674756 52675220 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033960
chr12 52674771 52675214 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546967
chr12 52674771 52675214 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108033961
chr12 52674838 52675194 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546970
chr12 52674838 52675194 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033964
chr12 52674997 52675153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546972
chr12 52674997 52675153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033967
chr12 52675009 52675393 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546973
chr12 52675009 52675393 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033968
chr12 52675029 52675339 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033969
Genes associated with rs949391[chr12:52675098], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More