EnhancerDB
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  3. rs9630643[chr16:87887748]
Enhancers that have rs9630643[chr16:87887748]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs9630643[chr16:87887748]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221259
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221260
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221261
chr16 87886986 87888750 ZNF274 GTRD no Liver (HepG2) 21735201
chr16 87886986 87888750 ZNF274 GTRD no Liver (HepG2) 108221270
chr16 87887177 87888359 EP300 UCSC Txn Factor no Conserved 108221271
chr16 87887634 87888728 AR GTRD no Prostate (PC-3) 21735202
chr16 87887634 87888728 AR GTRD no Prostate (PC-3) 108221272
chr16 87887731 87887751 RREB1 JASPAR yes 12247535
Genes associated with rs9630643[chr16:87887748], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 87635441 87731762 + JPH3 ENSG00000154118.8 87635441 155986 Uterus 0.203488 15146