EnhancerDB
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  3. rs9660802[chr1:227017031]
Enhancers that have rs9660802[chr1:227017031]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9660802[chr1:227017031]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227016879 227017604 ZNF143 GTRD no Epithelial (MCF-7) 21387776
chr1 227016928 227017376 ZNF143 GTRD no Epithelial (MCF-7) 21387777
chr1 227016962 227017556 ZNF143 GTRD no Epithelial (MCF-7) 21387778
chr1 227017021 227017439 ZNF143 GTRD no Epithelial (MCF-7) 21387779
Genes associated with rs9660802[chr1:227017031], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 227057885 227083806 + PSEN2 ENSG00000143801.12 227057885 40854 Pancreas 6.75826e-05 1903