EnhancerDB
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  3. rs9727418[chr1:204260145]
Enhancers that have rs9727418[chr1:204260145]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9727418[chr1:204260145]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204260137 204260148 NFIL3 JASPAR yes 34688973
chr1 204260139 204260160 IRF1 JASPAR yes 34688974
chr1 204260141 204260156 IRF9 JASPAR yes 34688975
chr1 204260142 204260156 IRF7 JASPAR yes 34688976
chr1 204260142 204260156 IRF8 JASPAR yes 34688977
chr1 204260143 204260157 STAT1 JASPAR yes 34688978
chr1 204260144 204260156 IRF1 JASPAR yes 34688979
Genes associated with rs9727418[chr1:204260145], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More