EnhancerDB
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Enhancers that have rs980330[chr17:39066292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs980330[chr17:39066292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39065824 39066914 P63 GTRD no Skin (Keratinocyte) 21757205
chr17 39065824 39066914 P63 GTRD no Skin (Keratinocyte) 108257921
chr17 39065887 39066797 P63 GTRD no Skin (Keratinocyte) 21757206
chr17 39065887 39066797 P63 GTRD no Skin (Keratinocyte) 108257922
chr17 39065955 39066745 P63 GTRD no Skin (Keratinocyte) 21757207
chr17 39065955 39066745 P63 GTRD no Skin (Keratinocyte) 108257923
chr17 39066064 39066817 P63 GTRD no Skin (Keratinocyte) 21757208
chr17 39066064 39066817 P63 GTRD no Skin (Keratinocyte) 108257924
chr17 39066153 39066417 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757209
chr17 39066170 39066460 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757210
chr17 39066174 39066430 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757211
chr17 39066192 39066416 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757212
chr17 39066207 39066487 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757213
Genes associated with rs980330[chr17:39066292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More