EnhancerDB
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  3. rs9890143[chr17:71285059]
Enhancers that have rs9890143[chr17:71285059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 71282705 71302156 enh17360
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs9890143[chr17:71285059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 71285053 71285067 XBP1 JASPAR yes 55858223
chr17 71285055 71285060 ATF1 TRANSFAC yes 55858224
Genes associated with rs9890143[chr17:71285059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 71279763 71308314 - CDC42EP4 ENSG00000179604.8 71308314 0 Heart 0.0686849 16206
chr17 71279763 71308314 - CDC42EP4 ENSG00000179604.8 71308314 0 Pancreas 1.65884e-06 16206