EnhancerDB
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  3. rs9893180[chr17:59403886]
Enhancers that have rs9893180[chr17:59403886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs9893180[chr17:59403886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59403873 59403890 ZNF410 JASPAR yes 55148797
chr17 59403875 59403888 ATF4 JASPAR yes 55148798
chr17 59403885 59403895 GSC2 JASPAR yes 55148799
chr17 59403885 59403895 GSC JASPAR yes 55148800
chr17 59403886 59403895 PITX3 JASPAR yes 55148801
Genes associated with rs9893180[chr17:59403886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More