EnhancerDB
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  3. rs9895861[chr17:78772519]
Enhancers that have rs9895861[chr17:78772519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs9895861[chr17:78772519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78772516 78772527 E2F6 JASPAR yes 56281218
chr17 78772517 78772532 TFAP2C JASPAR yes 56281219
chr17 78772519 78772531 TFAP2A JASPAR yes 56281220
chr17 78772519 78772531 TFAP2B JASPAR yes 56281221
chr17 78772519 78772531 TFAP2C JASPAR yes 56281222
Genes associated with rs9895861[chr17:78772519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More