EnhancerDB
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Enhancers that have rs9900340[chr17:39010862]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39001145 39015955 enh17144
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs9900340[chr17:39010862]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39010325 39010895 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21756979
chr17 39010325 39010895 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108257848
chr17 39010387 39010963 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257849
chr17 39010415 39010919 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257852
chr17 39010416 39010900 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257853
chr17 39010437 39010873 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257857
chr17 39010438 39010942 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756981
chr17 39010438 39010942 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257858
chr17 39010448 39010882 FOSL2 UCSC Txn Factor no Conserved 108257859
chr17 39010448 39010882 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257860
chr17 39010449 39010933 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257861
chr17 39010463 39010866 EP300 UCSC Txn Factor no Conserved 108257862
chr17 39010495 39010865 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756982
chr17 39010495 39010865 CEBPB UCSC Txn Factor no Conserved 108257866
chr17 39010495 39010865 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257867
chr17 39010505 39010865 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257870
chr17 39010507 39010902 TCF12 UCSC Txn Factor no Conserved 108257871
chr17 39010507 39010902 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257872
chr17 39010522 39010866 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756984
chr17 39010522 39010866 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257879
chr17 39010545 39011021 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257885
chr17 39010557 39010941 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756986
chr17 39010557 39010941 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257887
chr17 39010639 39010879 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756991
chr17 39010639 39010879 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257904
chr17 39010849 39010865 SOX4 JASPAR yes 54240904
chr17 39010850 39010865 SOX21 JASPAR yes 54240905
chr17 39010850 39010866 SOX4 JASPAR yes 54240906
chr17 39010856 39010866 OLIG3 JASPAR yes 54240907
chr17 39010860 39010864 YY1 TRANSFAC yes 54240908
Genes associated with rs9900340[chr17:39010862], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More