EnhancerDB
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  3. rs9901653[chr17:41523736]
Enhancers that have rs9901653[chr17:41523736]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs9901653[chr17:41523736]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41520571 41526147 ZNF143 GTRD no Epithelial (MCF-7) 21760302
chr17 41520594 41525787 ZNF143 GTRD no Epithelial (MCF-7) 21760304
chr17 41520797 41523762 ZBTB33 GTRD no Lung (A549) 21760313
chr17 41520863 41526178 ZNF143 GTRD no Epithelial (MCF-7) 21760316
chr17 41523013 41524154 AR GTRD no Prostate (PC-3) 21760400
chr17 41523363 41525123 ZNF143 GTRD no Epithelial (MCF-7) 21760403
chr17 41523419 41524927 ZNF143 GTRD no Epithelial (MCF-7) 21760404
chr17 41523503 41524516 ZNF274 GTRD no Cervix (HeLa-S3) 21760405
chr17 41523541 41524874 ZNF143 GTRD no Epithelial (MCF-7) 21760406
chr17 41523622 41524326 ZNF143 GTRD no Epithelial (MCF-7) 21760407
chr17 41523624 41525585 ZNF143 GTRD no Epithelial (MCF-7) 21760408
chr17 41523633 41524612 ZNF143 GTRD no Epithelial (MCF-7) 21760409
chr17 41523639 41524060 ZNF143 GTRD no Epithelial (MCF-7) 21760410
chr17 41523647 41525933 ZNF143 GTRD no Epithelial (MCF-7) 21760411
chr17 41523659 41525014 ZNF143 GTRD no Epithelial (MCF-7) 21760412
chr17 41523660 41526159 ZNF143 GTRD no Epithelial (MCF-7) 21760413
chr17 41523663 41525001 ZNF143 GTRD no Epithelial (MCF-7) 21760414
chr17 41523681 41524793 ZNF143 GTRD no Epithelial (MCF-7) 21760415
chr17 41523710 41524766 ZNF143 GTRD no Epithelial (MCF-7) 21760416
chr17 41523732 41523736 H1TF2 TRANSFAC yes 54347485
chr17 41523732 41523736 NFE TRANSFAC yes 54347486
chr17 41523732 41523736 SRF TRANSFAC yes 54347487
chr17 41523732 41523742 HOXB13 JASPAR yes 54347488
Genes associated with rs9901653[chr17:41523736], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 41476327 41478505 + ARL4D ENSG00000175906.4 41476327 45231 Heart 0.0865177 15896
chr17 41561233 41621831 + DHX8 ENSG00000067596.6 41561233 37497 Stomach 0.160286 15897
chr17 40932696 40948954 + WNK4 ENSG00000126562.12 40932696 574782 Adrenal 0.385857 15877