EnhancerDB
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Enhancers that have rs9903421[chr17:39067912]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs9903421[chr17:39067912]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39067577 39068099 ZNF143 GTRD no Epithelial (MCF-7) 21757215
chr17 39067783 39068273 TCF7L2 GTRD no Colon (HCT116) 21757216
chr17 39067892 39068209 TCF7L2 GTRD no Colon (HCT116) 21757217
chr17 39067910 39067916 SOX10 JASPAR yes 54243527
Genes associated with rs9903421[chr17:39067912], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 39155447 39156138 - KRTAP3-2 ENSG00000212900.1 39156138 87535 Esophagus 0.0875776 15787