EnhancerDB
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  3. rs9905376[chr17:38679583]
Enhancers that have rs9905376[chr17:38679583]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9905376[chr17:38679583]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38679226 38679742 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754963
chr17 38679574 38679585 PHOX2A JASPAR yes 54221172
chr17 38679577 38679587 ALX3 JASPAR yes 54221173
chr17 38679577 38679587 LBX2 JASPAR yes 54221174
chr17 38679577 38679587 MIXL1 JASPAR yes 54221175
chr17 38679578 38679586 LHX9 JASPAR yes 54221176
chr17 38679578 38679586 SHOX JASPAR yes 54221177
Genes associated with rs9905376[chr17:38679583], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More