EnhancerDB
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  3. rs9909468[chr17:38698189]
Enhancers that have rs9909468[chr17:38698189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9909468[chr17:38698189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38696530 38698210 ZNF274 GTRD no Blood (GM12878) 21755188
chr17 38696530 38698210 ZNF274 GTRD no Blood (GM12878) 108255683
chr17 38696530 38698210 ZNF274 GTRD no Blood (GM12878) 108255684
chr17 38697916 38698368 SOX2 GTRD no Neural Stem Cells (H9) 108255731
chr17 38697995 38698255 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21755247
chr17 38697995 38698255 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108255733
chr17 38698003 38698260 SOX2 GTRD no Neural Stem Cells (H9) 108255734
Genes associated with rs9909468[chr17:38698189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More