EnhancerDB
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  3. rs9915820[chr17:38697323]
Enhancers that have rs9915820[chr17:38697323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9915820[chr17:38697323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38696463 38697364 ZBTB33 GTRD no Lung (A549) 108255674
chr17 38696472 38697358 ZBTB33 GTRD no Lung (A549) 108255676
chr17 38696481 38697433 ZNF274 GTRD no Blood (GM12878) 21755185
chr17 38696481 38697433 ZNF274 GTRD no Blood (GM12878) 108255679
chr17 38696530 38698210 ZNF274 GTRD no Blood (GM12878) 21755188
chr17 38696530 38698210 ZNF274 GTRD no Blood (GM12878) 108255683
chr17 38696530 38698210 ZNF274 GTRD no Blood (GM12878) 108255684
chr17 38696559 38697815 ZBTB33 GTRD no Lung (A549) 108255692
chr17 38696810 38697506 ZNF274 GTRD no Liver (HepG2) 21755226
chr17 38696810 38697506 ZNF274 GTRD no Liver (HepG2) 108255725
chr17 38697027 38697459 ZNF274 GTRD no Liver (HepG2) 21755230
chr17 38697027 38697459 ZNF274 GTRD no Liver (HepG2) 108255729
chr17 38697091 38697489 ZNF274 GTRD no Liver (HepG2) 21755231
chr17 38697142 38697612 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21755232
chr17 38697210 38697806 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21755233
chr17 38697212 38697808 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21755234
chr17 38697261 38697517 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21755235
chr17 38697268 38697558 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21755236
chr17 38697281 38697561 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21755237
chr17 38697291 38697627 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21755238
chr17 38697323 38697327 LFA1 TRANSFAC yes 54223949
Genes associated with rs9915820[chr17:38697323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More