EnhancerDB
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  3. rs9915939[chr17:80448474]
Enhancers that have rs9915939[chr17:80448474]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs9915939[chr17:80448474]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80446210 80448570 TCF7L2 GTRD no Colon (HCT116) 21800287
chr17 80447578 80448478 P63 GTRD no Skin (Keratinocyte) 21800288
chr17 80447702 80448496 P63 GTRD no Skin (Keratinocyte) 21800289
chr17 80447961 80448522 ZNF274 GTRD no Bone Marrow (K562) 21800290
chr17 80448031 80451023 TCF7L2 GTRD no Colon (HCT116) 21800291
chr17 80448126 80450222 TCF7L2 GTRD no Colon (HCT116) 21800292
chr17 80448165 80448772 ZNF143 GTRD no Epithelial (MCF-7) 21800293
chr17 80448212 80448818 TCF7L2 GTRD no Colon (HCT116) 21800294
chr17 80448374 80448926 TCF7L2 GTRD no Colon (HCT116) 21800295
chr17 80448417 80448910 ZNF274 GTRD no Bone Marrow (K562) 21800296
chr17 80448461 80448481 RREB1 JASPAR yes 56366895
Genes associated with rs9915939[chr17:80448474], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More