EnhancerDB
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  3. rs992661[chr1:19261408]
Enhancers that have rs992661[chr1:19261408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs992661[chr1:19261408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19261404 19261410 LEF1 TRANSFAC yes 27163042
chr1 19261404 19261410 SOX10 JASPAR yes 27163043
chr1 19261408 19261419 GCM1 JASPAR yes 27163044
Genes associated with rs992661[chr1:19261408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More