EnhancerDB
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  3. rs9934340[chr16:85370905]
Enhancers that have rs9934340[chr16:85370905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9934340[chr16:85370905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85367918 85380182 ZNF143 GTRD no Epithelial (MCF-7) 21723881
chr16 85367918 85380182 ZNF143 GTRD no Epithelial (MCF-7) 108213816
chr16 85367931 85373653 TCF7L2 GTRD no Colon (HCT116) 21723882
chr16 85367931 85373653 TCF7L2 GTRD no Colon (HCT116) 108213817
chr16 85368075 85371041 ZNF274 GTRD no Bone Marrow (K562) 21723887
chr16 85368075 85371041 ZNF274 GTRD no Bone Marrow (K562) 108213822
chr16 85368611 85371091 ZNF274 GTRD no Bone Marrow (K562) 21723922
chr16 85368611 85371091 ZNF274 GTRD no Bone Marrow (K562) 108213861
chr16 85368611 85372097 ZNF274 GTRD no Bone Marrow (K562) 21723923
chr16 85368611 85372097 ZNF274 GTRD no Bone Marrow (K562) 108213862
chr16 85368647 85371407 ZNF274 GTRD no Bone Marrow (K562) 21723926
chr16 85368647 85371407 ZNF274 GTRD no Bone Marrow (K562) 108213865
chr16 85368668 85371283 ZNF143 GTRD no Epithelial (MCF-7) 21723927
chr16 85368668 85371283 ZNF143 GTRD no Epithelial (MCF-7) 108213866
chr16 85368715 85371036 ZNF143 GTRD no Epithelial (MCF-7) 21723930
chr16 85368715 85371036 ZNF143 GTRD no Epithelial (MCF-7) 108213871
chr16 85369026 85371865 ZNF143 GTRD no Epithelial (MCF-7) 21723944
chr16 85369164 85371091 ZNF274 GTRD no Bone Marrow (K562) 21723946
chr16 85369180 85370986 ZNF143 GTRD no Epithelial (MCF-7) 21723947
chr16 85369397 85371536 ZNF143 GTRD no Epithelial (MCF-7) 21723949
chr16 85369398 85371265 ZNF143 GTRD no Epithelial (MCF-7) 21723950
chr16 85369398 85372137 ZNF274 GTRD no Bone Marrow (K562) 21723951
chr16 85369401 85374095 TCF7L2 GTRD no Colon (HCT116) 21723952
chr16 85369441 85375900 ZNF143 GTRD no Epithelial (MCF-7) 21723956
chr16 85369471 85371458 ZNF274 GTRD no Bone Marrow (K562) 21723957
chr16 85369478 85371286 ZNF274 GTRD no Bone Marrow (K562) 21723958
chr16 85369496 85372292 TCF7L2 GTRD no Colon (HCT116) 21723959
chr16 85369540 85371083 ZNF143 GTRD no Epithelial (MCF-7) 21723962
chr16 85369688 85372267 TCF7L2 GTRD no Colon (HCT116) 21723972
chr16 85369698 85371524 ZBTB33 GTRD no Brain (SK-N-SH) 21723974
chr16 85369777 85372165 TCF7L2 GTRD no Colon (HCT116) 21723981
chr16 85370159 85371448 ZNF274 GTRD no Bone Marrow (K562) 21724001
chr16 85370361 85371372 ZNF274 GTRD no Bone Marrow (K562) 21724003
chr16 85370589 85371279 ZNF274 GTRD no Bone Marrow (K562) 21724005
chr16 85370631 85371312 ZNF274 GTRD no Bone Marrow (K562) 21724006
chr16 85370671 85371218 ZBTB33 GTRD no Brain (SK-N-SH) 21724007
chr16 85370721 85371361 ZBTB33 GTRD no Brain (SK-N-SH) 21724008
chr16 85370798 85371415 TCF7L2 GTRD no Colon (HCT116) 21724009
chr16 85370860 85371512 TCF7L2 GTRD no Colon (HCT116) 21724010
chr16 85370884 85372208 ZNF274 GTRD no Bone Marrow (K562) 21724011
chr16 85370886 85370907 IRF1 JASPAR yes 12049726
chr16 85370891 85370906 FOXP1 JASPAR yes 12049728
chr16 85370891 85370912 IRF1 JASPAR yes 12049729
chr16 85370892 85370907 FOXP1 JASPAR yes 12049730
chr16 85370892 85370913 IRF1 JASPAR yes 12049731
chr16 85370893 85370908 FOXP1 JASPAR yes 12049732
chr16 85370893 85370914 IRF1 JASPAR yes 12049733
chr16 85370897 85370918 IRF1 JASPAR yes 12049734
chr16 85370898 85370913 FOXP1 JASPAR yes 12049735
chr16 85370898 85370919 IRF1 JASPAR yes 12049736
chr16 85370899 85370914 STAT2 JASPAR yes 12049737
chr16 85370902 85370923 IRF1 JASPAR yes 12049738
chr16 85370903 85370918 FOXP1 JASPAR yes 12049739
chr16 85370903 85370924 IRF1 JASPAR yes 12049740
Genes associated with rs9934340[chr16:85370905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More