EnhancerDB
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  3. rs9938649[chr16:25060116]
Enhancers that have rs9938649[chr16:25060116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 25036065 25069195 enh3955
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs9938649[chr16:25060116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25059671 25060247 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21699988
chr16 25059697 25060287 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21699989
chr16 25059773 25060129 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21699991
chr16 25059807 25060277 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21699992
chr16 25059824 25060200 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21699993
chr16 25059832 25060129 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21699994
chr16 25059853 25060223 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21699995
chr16 25059859 25060189 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21699996
chr16 25059865 25060205 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21699997
chr16 25059867 25060267 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21699998
chr16 25059873 25060329 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21699999
chr16 25059876 25060196 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700000
chr16 25059881 25060217 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700002
chr16 25059882 25060322 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700003
chr16 25059905 25060124 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700005
chr16 25059907 25060297 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700006
chr16 25059914 25060284 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700007
chr16 25059916 25060140 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700008
chr16 25059916 25060292 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700009
chr16 25059919 25060121 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700010
chr16 25059934 25060214 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700012
chr16 25059935 25060179 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700013
chr16 25059948 25060344 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700015
chr16 25059953 25060237 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700016
chr16 25059969 25060245 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700018
chr16 25059982 25060578 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700019
chr16 25059987 25060223 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700020
chr16 25059989 25060219 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700021
chr16 25059989 25060613 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700022
chr16 25060015 25060158 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700023
chr16 25060044 25060548 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700024
chr16 25060077 25060397 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700025
chr16 25060082 25060538 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700026
chr16 25060113 25060469 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700027
chr16 25060114 25060123 THAP1 JASPAR yes 10099708
Genes associated with rs9938649[chr16:25060116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More