EnhancerDB
  1. Home
  2. SNP
  3. rs9939275[chr16:29280503]
Enhancers that have rs9939275[chr16:29280503]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs9939275[chr16:29280503]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29280167 29280683 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702074
chr16 29280190 29280586 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702075
chr16 29280208 29280738 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702076
chr16 29280400 29280916 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702078
chr16 29280495 29280510 NR2C2 JASPAR yes 10256094
chr16 29280496 29280510 RXRB JASPAR yes 10256095
chr16 29280496 29280510 RXRG JASPAR yes 10256096
chr16 29280500 29280510 RORA JASPAR yes 10256097
Genes associated with rs9939275[chr16:29280503], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More