EnhancerDB
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  3. rs9943695[chr12:52541799]
Enhancers that have rs9943695[chr12:52541799]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs9943695[chr12:52541799]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033122
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033123
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033124
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033125
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546373
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033126
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033127
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033128
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033129
chr12 52541195 52542449 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546410
chr12 52541195 52542449 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033199
chr12 52541195 52542449 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033200
chr12 52541217 52541877 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546413
chr12 52541217 52541877 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033206
chr12 52541222 52542932 ZBTB33 GTRD no Lung (A549) 108033207
chr12 52541222 52542932 ZBTB33 GTRD no Lung (A549) 108033208
chr12 52541299 52542654 P63 GTRD no Skin (Keratinocyte) 21546417
chr12 52541299 52542654 P63 GTRD no Skin (Keratinocyte) 108033217
chr12 52541299 52542654 P63 GTRD no Skin (Keratinocyte) 108033218
chr12 52541388 52542783 P63 GTRD no Skin (Keratinocyte) 21546421
chr12 52541388 52542783 P63 GTRD no Skin (Keratinocyte) 108033222
chr12 52541388 52542783 P63 GTRD no Skin (Keratinocyte) 108033223
chr12 52541668 52541837 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546423
chr12 52541680 52542284 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546424
chr12 52541680 52542284 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033225
chr12 52541795 52541807 NHLH1 JASPAR yes 120921931
Genes associated with rs9943695[chr12:52541799], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More