EnhancerDB
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  3. rs9946508[chr18:55441840]
Enhancers that have rs9946508[chr18:55441840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9946508[chr18:55441840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55441825 55441840 MEF2A JASPAR yes 110883960
chr18 55441828 55441842 FOXF2 JASPAR yes 110883961
chr18 55441828 55441842 ONECUT2 JASPAR yes 110883962
chr18 55441828 55441842 ONECUT3 JASPAR yes 110883963
chr18 55441828 55441843 FOXP1 JASPAR yes 110883964
chr18 55441829 55441844 FOXA1 JASPAR yes 110883965
chr18 55441830 55441841 FOXB1 JASPAR yes 110883966
chr18 55441830 55441841 FOXC1 JASPAR yes 110883967
chr18 55441830 55441842 FOXC2 JASPAR yes 110883968
chr18 55441831 55441843 FOXI1 JASPAR yes 110883969
chr18 55441840 55441851 PROP1 JASPAR yes 110883970
Genes associated with rs9946508[chr18:55441840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More