EnhancerDB
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  3. CDX2[chr17:40571312-40571323]
Chromosome characteristics of CDX2[chr17:40571312-40571323]
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Enhancers possibly regulated by CDX2[chr17:40571312-40571323]
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Chrom Start End Enhancer ID Tissues that enhancer appears More
chr17 40556065 40574459 enh17161
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
SNP sites on CDX2[chr17:40571312-40571323]
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Chrom Position dbSNP ID Reference Allele Alternative Allele id More
chr17 40571318 rs569817954 T C 4878611
chr17 40571323 rs143185919 G GTTA 4878612
chr17 40571323 rs145950645 G GTTA 4878613
chr17 40571323 rs753425163 G GTTA 4878614
Genes possibly regulated by CDX2[chr17:40571312-40571323]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
chr17 40554470 40575535 - PTRF ENSG00000177469.12 40575535 0.76 0.99 4212 15861
Expression level of Genes
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miRNAs possibly regulated by CDX2[chr17:40571312-40571323]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End strand miRNA Name miRBase ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
Expression level of miRNAs
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No results