EnhancerDB
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Enhancers that regulate ALS2[ENSG00000003393.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 202560879 202561324 vista34389 202645912 84588
VISTA
chr2 202598345 202602495 enh92992 202645912 43417
Liver (HepG2)
chr2 202617565 202621715 enh92993 202645912 24197
Liver (HepG2)
chr2 202634485 202641715 enh70128 202645912 4197
Prostate (PC-3) Neural Stem Cells (H9)
chr2 202658572 202665355 enh34149 202645912 12660
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1)
chr2 202677305 202683162 enh115730 202645912 31393
Brain (SK-N-SH)
chr2 202690505 202698475 enh34150 202645912 44593
Astrocyte
chr2 202699245 202705035 enh76525 202645912 53333
Muscle (A673)
chr2 202705332 202709482 enh70129 202645912 59420
Neural Stem Cells (H9)
chr2 202720245 202724395 enh109918 202645912 74333
Stomach
chr2 202723656 202723936 vista34390 202645912 77744
VISTA
chr2 202729945 202734095 enh53515 202645912 84033
Large Intestine
chr2 202742845 202750815 enh6109 202645912 96933
Brain (SK-N-SH) Astrocyte Lung Muscle (A673) Blood (Karpas-422) Muscle (Myotube) Heart
Transcript facotrs that regulate ALS2[ENSG00000003393.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 202640928 202640949 ZNF263 JASPAR yes 202645912 4963 80155870
chr2 202640930 202640935 ETS2 TRANSFAC yes 202645912 4977 80155871
chr2 202640930 202640945 PRDM1 JASPAR yes 202645912 4967 80155872
chr2 202640931 202640952 ZNF263 JASPAR yes 202645912 4960 80155873
chr2 202640938 202640953 PRDM1 JASPAR yes 202645912 4959 80155874
chr2 202640959 202640969 MSC JASPAR yes 202645912 4943 80155875
chr2 202640974 202640995 IRF1 JASPAR yes 202645912 4917 80155876
chr2 202640978 202640992 SPI1 JASPAR yes 202645912 4920 80155877
chr2 202640978 202640992 SPIC JASPAR yes 202645912 4920 80155878
chr2 202640979 202640992 ELF1 JASPAR yes 202645912 4920 80155879
chr2 202640982 202640992 GABPA JASPAR yes 202645912 4920 80155880
chr2 202640987 202641003 SOX8 JASPAR yes 202645912 4909 80155881
chr2 202641003 202641013 HOXA13 JASPAR yes 202645912 4899 80155882
chr2 202641071 202641080 VENTX JASPAR yes 202645912 4832 80155883
chr2 202641074 202641084 ERF JASPAR yes 202645912 4828 80155884
chr2 202641076 202641082 ETS1 JASPAR yes 202645912 4830 80155885
chr2 202641076 202641090 POU4F1 JASPAR yes 202645912 4822 80155886
chr2 202641090 202641111 ZNF263 JASPAR yes 202645912 4801 80155887
chr2 202641096 202641106 ZNF740 JASPAR yes 202645912 4806 80155888
chr2 202641102 202641116 MTF1 JASPAR yes 202645912 4796 80155889
chr2 202641107 202641118 FOXA1 JASPAR yes 202645912 4794 80155890
chr2 202641107 202641122 FOXA1 JASPAR yes 202645912 4790 80155891
chr2 202641108 202641119 FOXB1 JASPAR yes 202645912 4793 80155892
chr2 202641108 202641119 FOXC1 JASPAR yes 202645912 4793 80155893
chr2 202641108 202641120 FOXC2 JASPAR yes 202645912 4792 80155894
chr2 202641109 202641120 FOXP2 JASPAR yes 202645912 4792 80155895
chr2 202641110 202641118 FOXO3 JASPAR yes 202645912 4794 80155896
chr2 202641111 202641118 FOXD2 JASPAR yes 202645912 4794 80155897
chr2 202641111 202641118 FOXI1 JASPAR yes 202645912 4794 80155898
chr2 202641111 202641118 FOXL1 JASPAR yes 202645912 4794 80155899
chr2 202641111 202641118 FOXO4 JASPAR yes 202645912 4794 80155900
chr2 202641111 202641118 FOXO6 JASPAR yes 202645912 4794 80155901
chr2 202641111 202641118 FOXP3 JASPAR yes 202645912 4794 80155902
chr2 202641111 202641119 FOXD1 JASPAR yes 202645912 4793 80155903
chr2 202641111 202641119 FOXG1 JASPAR yes 202645912 4793 80155904
chr2 202641111 202641119 FOXO3 JASPAR yes 202645912 4793 80155905
chr2 202641118 202641133 AR JASPAR yes 202645912 4779 80155906
chr2 202641118 202641135 NR3C1 JASPAR yes 202645912 4777 80155907
chr2 202641118 202641135 NR3C2 JASPAR yes 202645912 4777 80155908
chr2 202641120 202641135 AR JASPAR yes 202645912 4777 80155909
chr2 202641129 202641140 STAT1 JASPAR yes 202645912 4772 80155910
chr2 202641129 202641140 STAT3 JASPAR yes 202645912 4772 80155911
chr2 202641144 202641148 YY1 TRANSFAC yes 202645912 4764 80155912
chr2 202641163 202641179 SOX8 JASPAR yes 202645912 4733 80155913
chr2 202641167 202641181 POU4F1 JASPAR yes 202645912 4731 80155914
chr2 202641172 202641176 YY1 TRANSFAC yes 202645912 4736 80155915
chr2 202641178 202641184 HiNF-A TRANSFAC yes 202645912 4728 80155916
chr2 202641183 202641187 YY1 TRANSFAC yes 202645912 4725 80155917
chr2 202641191 202641199 OTX2 JASPAR yes 202645912 4713 80155918
chr2 202641194 202641210 POU4F3 JASPAR yes 202645912 4702 80155919
chr2 202641195 202641206 PHOX2A JASPAR yes 202645912 4706 80155920
chr2 202641196 202641210 POU4F1 JASPAR yes 202645912 4702 80155921
chr2 202641197 202641209 HNF1B JASPAR yes 202645912 4703 80155922
chr2 202641204 202641213 PITX3 JASPAR yes 202645912 4699 80155923
chr2 202641205 202641213 RHOXF1 JASPAR yes 202645912 4699 80155924
chr2 202641208 202641224 ZNF143 JASPAR yes 202645912 4688 80155925
chr2 202641226 202641242 POU4F2 JASPAR yes 202645912 4670 80155926
chr2 202641234 202641238 TEAD2 TRANSFAC yes 202645912 4674 80155927
chr2 202641242 202641245 MYB TRANSFAC yes 202645912 4667 80155928
chr2 202641248 202641264 POU4F2 JASPAR yes 202645912 4648 80155929
chr2 202641277 202641281 YY1 TRANSFAC yes 202645912 4631 80155930
chr2 202641283 202641301 TP63 JASPAR yes 202645912 4611 80155931
chr2 202641283 202641301 TP73 JASPAR yes 202645912 4611 80155932
chr2 202641349 202641353 YY1 TRANSFAC yes 202645912 4559 80155933
chr2 202641362 202641368 MYC TRANSFAC yes 202645912 4544 80155934
chr2 202641370 202641382 YY1 JASPAR yes 202645912 4530 80155935
chr2 202641371 202641387 E2F2 JASPAR yes 202645912 4525 80155936
chr2 202641388 202641394 TCF1 TRANSFAC yes 202645912 4518 80155937
chr2 202641409 202641423 TCF7L2 JASPAR yes 202645912 4489 80155938
chr2 202641409 202641424 LEF1 JASPAR yes 202645912 4488 80155939
chr2 202641413 202641419 TCF1 TRANSFAC yes 202645912 4493 80155940
chr2 202641422 202641436 BATF3 JASPAR yes 202645912 4476 80155941
chr2 202641440 202641454 GATA2 JASPAR yes 202645912 4458 80155942
chr2 202641445 202641448 MYB TRANSFAC yes 202645912 4464 80155943
chr2 202641467 202641472 SP1 TRANSFAC yes 202645912 4440 80155944
chr2 202641474 202641489 FOXP1 JASPAR yes 202645912 4423 80155945
chr2 202641476 202641479 MYB TRANSFAC yes 202645912 4433 80155946
chr2 202641477 202641489 FOXI1 JASPAR yes 202645912 4423 80155947
chr2 202641479 202641493 SPIC JASPAR yes 202645912 4419 80155948
chr2 202641480 202641493 ELF1 JASPAR yes 202645912 4419 80155949
chr2 202641481 202641493 EHF JASPAR yes 202645912 4419 80155950
chr2 202641481 202641493 ELF1 JASPAR yes 202645912 4419 80155951
chr2 202641481 202641493 ELF4 JASPAR yes 202645912 4419 80155952
chr2 202641481 202641494 ELF3 JASPAR yes 202645912 4418 80155953
chr2 202641482 202641493 ELF5 JASPAR yes 202645912 4419 80155954
chr2 202641482 202641493 ETV2 JASPAR yes 202645912 4419 80155955
chr2 202641483 202641493 ERF JASPAR yes 202645912 4419 80155956
chr2 202641483 202641493 ERG JASPAR yes 202645912 4419 80155957
chr2 202641483 202641493 ETS1 JASPAR yes 202645912 4419 80155958
chr2 202641483 202641493 FEV JASPAR yes 202645912 4419 80155959
chr2 202641483 202641493 FLI1 JASPAR yes 202645912 4419 80155960
chr2 202641483 202641494 FLI1 JASPAR yes 202645912 4418 80155961
chr2 202641484 202641492 FEV JASPAR yes 202645912 4420 80155962
chr2 202641486 202641497 FOXH1 JASPAR yes 202645912 4415 80155963
chr2 202641500 202641506 TBP TRANSFAC yes 202645912 4406 80155964
chr2 202641516 202641527 DMRT3 JASPAR yes 202645912 4385 80155965
chr2 202641523 202641538 PRDM1 JASPAR yes 202645912 4374 80155966
chr2 202641523 202641538 STAT2 JASPAR yes 202645912 4374 80155967
chr2 202641524 202641538 STAT1 JASPAR yes 202645912 4374 80155968
chr2 202641525 202641539 IRF7 JASPAR yes 202645912 4373 80155969
chr2 202641525 202641539 IRF8 JASPAR yes 202645912 4373 80155970
chr2 202641525 202641540 IRF9 JASPAR yes 202645912 4372 80155971
chr2 202641561 202641571 HOXA13 JASPAR yes 202645912 4341 80155972
chr2 202641561 202641571 HOXD13 JASPAR yes 202645912 4341 80155973
chr2 202641564 202641579 MEF2C JASPAR yes 202645912 4333 80155974
chr2 202641565 202641580 MEF2A JASPAR yes 202645912 4332 80155975
chr2 202641571 202641584 POU3F3 JASPAR yes 202645912 4328 80155976
chr2 202641572 202641583 FOXC1 JASPAR yes 202645912 4329 80155977
chr2 202641581 202641590 SRY JASPAR yes 202645912 4322 80155978
chr2 202641587 202641590 MYB TRANSFAC yes 202645912 4322 80155979
chr2 202641604 202641615 RUNX1 JASPAR yes 202645912 4297 80155980
chr2 202641615 202641619 YY1 TRANSFAC yes 202645912 4293 80155981
chr2 202641635 202641651 POU4F3 JASPAR yes 202645912 4261 80155982
chr2 202641638 202641653 HNF1A JASPAR yes 202645912 4259 80155983
chr2 202641642 202641652 POU6F1 JASPAR yes 202645912 4260 80155984
chr2 202641645 202641649 YY1 TRANSFAC yes 202645912 4263 80155985
chr2 202641654 202641664 BARHL2 JASPAR yes 202645912 4248 80155986
chr2 202641656 202641660 YY1 TRANSFAC yes 202645912 4252 80155987
chr2 202641656 202641669 EOMES JASPAR yes 202645912 4243 80155988
chr2 202641658 202641668 TBR1 JASPAR yes 202645912 4244 80155989
chr2 202641658 202641669 TBX2 JASPAR yes 202645912 4243 80155990
chr2 202641659 202641669 TBX21 JASPAR yes 202645912 4243 80155991
chr2 202641660 202641663 MYB TRANSFAC yes 202645912 4249 80155992
chr2 202641677 202641689 HNF1B JASPAR yes 202645912 4223 80155993
chr2 202641677 202641690 HNF1B JASPAR yes 202645912 4222 80155994
chr2 202641678 202641685 NKX3-1 JASPAR yes 202645912 4227 80155995
chr2 202641705 202641709 YY1 TRANSFAC yes 202645912 4203 80155996
SNPs associated with ALS2[ENSG00000003393.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 202645961 rs16838147 C G,T 49 Esophagus 3.99585e-14 6295076
chr2 202639198 rs193607 A G 0 Esophagus 3.64208e-05 6295027
chr2 202677865 rs77301615 A G 31953 Heart 0.00590953 6295153
chr2 202639198 rs193607 A G 0 Breast 3.08491e-10 6295027
chr2 202645961 rs16838147 C G,T 49 Ovary 0.00792118 6295076
chr2 202621624 rs796638490 AT A 0 Uterus 0.0269462 6294949
chr2 202645961 rs16838147 C G,T 49 Thyroid 2.82684e-12 6295076
chr2 202639198 rs193607 A G 0 Lung 8.04041e-09 6295027
chr2 202815530 rs7562987 G A 169618 Stomach 0.280585 6296054
chr2 202639198 rs193607 A G 0 Adrenal 0.00274508 6295027
Details of ALS2[ENSG00000003393.10]
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Genomic Location chr2:202565277-202645912[-]
TSS 202645912
Gene Name ALS2
Ensembl ID ENSG00000003393.10
ENTREZID 57679
Uniprot
A8K4R4
Q96Q42
Protein Name
ALS2 protein
Alsin
Amyotrophic lateral sclerosis 2 isoform 1
Amyotrophic lateral sclerosis 2 isoform 2
Expression levels of ALS2[ENSG00000003393.10]
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