EnhancerDB
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Enhancers that regulate PKD1[ENSG00000008710.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 2089262 2093412 enh64932 2185899 92487
Heart
chr16 2104972 2105164 vista21566 2185899 80735
VISTA
chr16 2130105 2134705 enh89790 2185899 51194
Prostate (RWPE1)
chr16 2138905 2143335 enh16501 2185899 42564
Placenta
chr16 2169469 2181557 enh3844 2185899 4342
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Uterus Blood (T-cell) Heart
chr16 2175102 2175363 vista21567 2185899 10536
VISTA
chr16 2203405 2213535 enh3845 2185899 17506
Brain (SK-N-SH) Ovary Astrocyte Blood (GM12878) Stomach Muscle (A673) Blood (Karpas-422) Muscle (Myotube) Uterus Heart
chr16 2209355 2209786 vista21568 2185899 23456
VISTA
chr16 2212881 2213081 vista21569 2185899 26982
VISTA
chr16 2219906 2220018 vista21570 2185899 34007
VISTA
Transcript facotrs that regulate PKD1[ENSG00000008710.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr16 2174294 2182854 TCF7L2 GTRD no Colon (HCT116) 2185899 3045 21684859
chr16 2174294 2182854 TCF7L2 GTRD no Colon (HCT116) 2185899 3045 108172262
chr16 2180895 2180899 YY1 TRANSFAC yes 2185899 5000 9172059
chr16 2180896 2180909 SMAD2 JASPAR yes 2185899 4990 9172060
chr16 2180905 2180924 REST JASPAR yes 2185899 4975 9172061
chr16 2180913 2180928 ESR2 JASPAR yes 2185899 4971 9172062
chr16 2180916 2180927 USF1 JASPAR yes 2185899 4972 9172063
chr16 2180916 2180927 USF2 JASPAR yes 2185899 4972 9172064
chr16 2180923 2180937 GLIS2 JASPAR yes 2185899 4962 9172065
chr16 2180969 2180989 ESR1 JASPAR yes 2185899 4910 9172066
chr16 2180976 2180981 SP1 TRANSFAC yes 2185899 4918 9172067
chr16 2180982 2180992 SREBF2 JASPAR yes 2185899 4907 9172068
chr16 2180984 2180997 JUN JASPAR yes 2185899 4902 9172069
chr16 2180988 2181002 BATF3 JASPAR yes 2185899 4897 9172070
chr16 2180995 2181016 REST JASPAR yes 2185899 4883 9172071
chr16 2180996 2181015 REST JASPAR yes 2185899 4884 9172072
chr16 2181009 2181022 SMAD2 JASPAR yes 2185899 4877 9172073
chr16 2181033 2181042 SOX9 JASPAR yes 2185899 4857 9172074
chr16 2181059 2181063 H1TF2 TRANSFAC yes 2185899 4836 9172075
chr16 2181059 2181063 NFE TRANSFAC yes 2185899 4836 9172076
chr16 2181059 2181063 SRF TRANSFAC yes 2185899 4836 9172077
chr16 2181061 2181072 HOXC13 JASPAR yes 2185899 4827 9172078
chr16 2181061 2181076 STAT1 JASPAR yes 2185899 4823 9172079
chr16 2181063 2181074 STAT1 JASPAR yes 2185899 4825 9172080
chr16 2181071 2181077 HiNF-A TRANSFAC yes 2185899 4822 9172081
chr16 2181073 2181093 RREB1 JASPAR yes 2185899 4806 9172082
chr16 2181075 2181081 SOX10 JASPAR yes 2185899 4818 9172083
chr16 2181076 2181087 FOXA1 JASPAR yes 2185899 4812 9172084
chr16 2181090 2181109 REST JASPAR yes 2185899 4790 9172085
chr16 2181100 2181115 JUND JASPAR yes 2185899 4784 9172086
chr16 2181175 2181186 CEBPB JASPAR yes 2185899 4713 9172087
chr16 2181176 2181186 CEBPB JASPAR yes 2185899 4713 9172088
chr16 2181176 2181186 CEBPD JASPAR yes 2185899 4713 9172089
chr16 2181176 2181186 CEBPE JASPAR yes 2185899 4713 9172090
chr16 2181176 2181186 CEBPG JASPAR yes 2185899 4713 9172091
chr16 2181176 2181187 CEBPA JASPAR yes 2185899 4712 9172092
chr16 2181181 2181202 IRF1 JASPAR yes 2185899 4697 9172093
chr16 2181182 2181203 ZNF263 JASPAR yes 2185899 4696 9172094
chr16 2181183 2181188 ETS2 TRANSFAC yes 2185899 4711 9172095
chr16 2181185 2181200 PRDM1 JASPAR yes 2185899 4699 9172096
chr16 2181185 2181206 ZNF263 JASPAR yes 2185899 4693 9172097
chr16 2181193 2181200 SPIB JASPAR yes 2185899 4699 9172098
chr16 2181193 2181204 FLI1 JASPAR yes 2185899 4695 9172099
chr16 2181194 2181202 EHF JASPAR yes 2185899 4697 9172100
chr16 2181200 2181205 ETS2 TRANSFAC yes 2185899 4694 9172101
chr16 2181201 2181216 HSF1 JASPAR yes 2185899 4683 9172102
chr16 2181209 2181229 TP53 JASPAR yes 2185899 4670 9172103
chr16 2181224 2181228 YY1 TRANSFAC yes 2185899 4671 9172104
chr16 2181236 2181241 SP1 TRANSFAC yes 2185899 4658 9172105
chr16 2181250 2181282 LUN1 TRANSFAC yes 2185899 4617 9172106
chr16 2181255 2181276 LUN1 TRANSFAC yes 2185899 4623 9172107
chr16 2181278 2181289 E2F1 JASPAR yes 2185899 4610 9172108
chr16 2181279 2181284 SP1 TRANSFAC yes 2185899 4615 9172109
chr16 2181279 2181290 E2F4 JASPAR yes 2185899 4609 9172110
chr16 2181279 2181290 E2F6 JASPAR yes 2185899 4609 9172111
chr16 2181280 2181285 SP1 TRANSFAC yes 2185899 4614 9172112
chr16 2181292 2181305 NR2F1 JASPAR yes 2185899 4594 9172113
chr16 2181296 2181300 ESR1 TRANSFAC yes 2185899 4599 9172114
chr16 2181322 2181325 MYB TRANSFAC yes 2185899 4574 9172115
chr16 2181327 2181340 NFKB1 JASPAR yes 2185899 4559 9172116
chr16 2181327 2181340 NFKB2 JASPAR yes 2185899 4559 9172117
chr16 2181343 2181358 MEF2C JASPAR yes 2185899 4541 9172118
chr16 2181344 2181359 MEF2A JASPAR yes 2185899 4540 9172119
chr16 2181345 2181357 MEF2A JASPAR yes 2185899 4542 9172120
chr16 2181345 2181357 MEF2B JASPAR yes 2185899 4542 9172121
chr16 2181345 2181357 MEF2D JASPAR yes 2185899 4542 9172122
chr16 2181363 2181382 REST JASPAR yes 2185899 4517 9172123
chr16 2181365 2181374 HIC2 JASPAR yes 2185899 4525 9172124
chr16 2181367 2181377 SP1 JASPAR yes 2185899 4522 9172125
chr16 2181368 2181372 LFA1 TRANSFAC yes 2185899 4527 9172126
chr16 2181377 2181382 SP1 TRANSFAC yes 2185899 4517 9172127
chr16 2181377 2181386 HIC2 JASPAR yes 2185899 4513 9172128
chr16 2181380 2181384 LFA1 TRANSFAC yes 2185899 4515 9172129
chr16 2181402 2181423 ZNF263 JASPAR yes 2185899 4476 9172130
chr16 2181420 2181430 SREBF2 JASPAR yes 2185899 4469 9172131
chr16 2181434 2181444 SP1 JASPAR yes 2185899 4455 9172132
chr16 2181436 2181441 SP1 TRANSFAC yes 2185899 4458 9172133
chr16 2181450 2181460 SREBF1 JASPAR yes 2185899 4439 9172134
chr16 2181459 2181465 YY1 JASPAR yes 2185899 4434 9172135
chr16 2181481 2181500 PAX5 JASPAR yes 2185899 4399 9172136
chr16 2181483 2181487 LFA1 TRANSFAC yes 2185899 4412 9172137
chr16 2181508 2181519 CDX2 JASPAR yes 2185899 4380 9172138
chr16 2181509 2181520 HOXA10 JASPAR yes 2185899 4379 9172139
chr16 2181510 2181519 CDX1 JASPAR yes 2185899 4380 9172140
chr16 2181510 2181520 HOXA13 JASPAR yes 2185899 4379 9172141
chr16 2181510 2181520 HOXB13 JASPAR yes 2185899 4379 9172142
chr16 2181510 2181520 HOXD13 JASPAR yes 2185899 4379 9172143
chr16 2181510 2181525 MEF2C JASPAR yes 2185899 4374 9172144
chr16 2181511 2181526 MEF2A JASPAR yes 2185899 4373 9172145
chr16 2181512 2181524 FOXC2 JASPAR yes 2185899 4375 9172146
chr16 2181512 2181524 MEF2A JASPAR yes 2185899 4375 9172147
chr16 2181512 2181524 MEF2B JASPAR yes 2185899 4375 9172148
chr16 2181512 2181524 MEF2D JASPAR yes 2185899 4375 9172149
chr16 2181513 2181523 MEF2A JASPAR yes 2185899 4376 9172150
chr16 2181514 2181528 FOXF2 JASPAR yes 2185899 4371 9172151
chr16 2181514 2181528 ONECUT2 JASPAR yes 2185899 4371 9172152
chr16 2181514 2181528 ONECUT3 JASPAR yes 2185899 4371 9172153
chr16 2181514 2181529 FOXP1 JASPAR yes 2185899 4370 9172154
chr16 2181515 2181530 FOXA1 JASPAR yes 2185899 4369 9172155
chr16 2181516 2181527 FOXB1 JASPAR yes 2185899 4372 9172156
chr16 2181516 2181527 FOXC1 JASPAR yes 2185899 4372 9172157
chr16 2181516 2181528 FOXC2 JASPAR yes 2185899 4371 9172158
chr16 2181517 2181529 FOXI1 JASPAR yes 2185899 4370 9172159
chr16 2181518 2181532 ONECUT2 JASPAR yes 2185899 4367 9172160
chr16 2181518 2181532 ONECUT3 JASPAR yes 2185899 4367 9172161
chr16 2181518 2181533 FOXP1 JASPAR yes 2185899 4366 9172162
chr16 2181518 2181533 HNF1A JASPAR yes 2185899 4366 9172163
chr16 2181519 2181533 POU4F1 JASPAR yes 2185899 4366 9172164
chr16 2181519 2181534 FOXA1 JASPAR yes 2185899 4365 9172165
chr16 2181519 2181535 POU4F2 JASPAR yes 2185899 4364 9172166
chr16 2181519 2181535 POU4F3 JASPAR yes 2185899 4364 9172167
chr16 2181520 2181531 FOXB1 JASPAR yes 2185899 4368 9172168
chr16 2181520 2181531 FOXC1 JASPAR yes 2185899 4368 9172169
chr16 2181520 2181531 PROP1 JASPAR yes 2185899 4368 9172170
chr16 2181520 2181532 FOXC2 JASPAR yes 2185899 4367 9172171
chr16 2181521 2181533 FOXI1 JASPAR yes 2185899 4366 9172172
chr16 2181522 2181536 ONECUT2 JASPAR yes 2185899 4363 9172173
chr16 2181522 2181536 ONECUT3 JASPAR yes 2185899 4363 9172174
chr16 2181522 2181537 FOXP1 JASPAR yes 2185899 4362 9172175
chr16 2181522 2181537 HNF1A JASPAR yes 2185899 4362 9172176
chr16 2181523 2181537 POU4F1 JASPAR yes 2185899 4362 9172177
chr16 2181523 2181538 FOXA1 JASPAR yes 2185899 4361 9172178
chr16 2181523 2181539 POU4F2 JASPAR yes 2185899 4360 9172179
chr16 2181523 2181539 POU4F3 JASPAR yes 2185899 4360 9172180
chr16 2181524 2181535 FOXB1 JASPAR yes 2185899 4364 9172181
chr16 2181524 2181535 FOXC1 JASPAR yes 2185899 4364 9172182
chr16 2181524 2181535 PROP1 JASPAR yes 2185899 4364 9172183
chr16 2181524 2181536 FOXC2 JASPAR yes 2185899 4363 9172184
chr16 2181525 2181537 FOXI1 JASPAR yes 2185899 4362 9172185
chr16 2181526 2181540 ONECUT2 JASPAR yes 2185899 4359 9172186
chr16 2181526 2181540 ONECUT3 JASPAR yes 2185899 4359 9172187
chr16 2181526 2181541 FOXP1 JASPAR yes 2185899 4358 9172188
chr16 2181526 2181541 HNF1A JASPAR yes 2185899 4358 9172189
chr16 2181527 2181541 POU4F1 JASPAR yes 2185899 4358 9172190
chr16 2181527 2181542 FOXA1 JASPAR yes 2185899 4357 9172191
chr16 2181527 2181543 POU4F2 JASPAR yes 2185899 4356 9172192
chr16 2181527 2181543 POU4F3 JASPAR yes 2185899 4356 9172193
chr16 2181528 2181539 FOXB1 JASPAR yes 2185899 4360 9172194
chr16 2181528 2181539 FOXC1 JASPAR yes 2185899 4360 9172195
chr16 2181528 2181539 PROP1 JASPAR yes 2185899 4360 9172196
chr16 2181528 2181540 FOXC2 JASPAR yes 2185899 4359 9172197
chr16 2181529 2181541 FOXI1 JASPAR yes 2185899 4358 9172198
chr16 2181530 2181544 ONECUT2 JASPAR yes 2185899 4355 9172199
chr16 2181530 2181544 ONECUT3 JASPAR yes 2185899 4355 9172200
chr16 2181530 2181545 FOXP1 JASPAR yes 2185899 4354 9172201
chr16 2181530 2181545 HNF1A JASPAR yes 2185899 4354 9172202
chr16 2181531 2181545 POU4F1 JASPAR yes 2185899 4354 9172203
chr16 2181531 2181546 FOXA1 JASPAR yes 2185899 4353 9172204
chr16 2181532 2181543 FOXB1 JASPAR yes 2185899 4356 9172205
chr16 2181532 2181543 FOXC1 JASPAR yes 2185899 4356 9172206
chr16 2181532 2181543 PROP1 JASPAR yes 2185899 4356 9172207
chr16 2181532 2181544 FOXC2 JASPAR yes 2185899 4355 9172208
chr16 2181533 2181545 FOXI1 JASPAR yes 2185899 4354 9172209
SNPs associated with PKD1[ENSG00000008710.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr16 2175808 rs78969059 G A 0 Esophagus 0.25775 4260310
chr16 2867450 rs71386691 G A,C 681551 Heart 0.200401 4264103
chr16 1187832 rs74004813 T C 950879 Heart 0.223854 4253437
chr16 2977247 rs145846665 A G 791348 Breast 0.184145 4265412
chr16 3123561 rs2015620 A T 937662 Spleen 0.260911 4266772
chr16 2726187 rs11644262 C A 540288 Ovary 0.446124 4263032
chr16 1297289 rs76428399 G A 841422 Liver 0.346198 4254770
Details of PKD1[ENSG00000008710.13]
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Genomic Location chr16:2138711-2185899[-]
TSS 2185899
Gene Name PKD1
Ensembl ID ENSG00000008710.13
ENTREZID 5310
Uniprot
P98161
Protein Name
PC-1 mutant
PKD1
Polycystic kidney disease-associated protein
Polycystin-1
Polysystin 1
Serine/threonine-protein kinase D1
Expression levels of PKD1[ENSG00000008710.13]
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