EnhancerDB
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Enhancers that regulate CTDP1[ENSG00000060069.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr18 77333245 77341975 enh32864 77439801 97826
Brain (SK-N-MC) Ovary Esophagus Astrocyte Stomach Thyroid Pancreas Uterus Thymus Heart
chr18 77342062 77353055 enh32865 77439801 86746
Prostate (RWPE1) Large Intestine Astrocyte Bone (Osteoblast) Lung Stomach Thyroid Pancreas Uterus Heart
chr18 77359345 77363495 enh91202 77439801 76306
Bone Marrow (K562)
chr18 77369085 77373342 enh32866 77439801 66459
Esophagus Astrocyte Colon (HCT116) Epithelial (MCF-7)
chr18 77382205 77389015 enh4942 77439801 50786
Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
chr18 77384640 77384762 vista28054 77439801 55039
VISTA
chr18 77385208 77385599 vista28055 77439801 54202
VISTA
chr18 77394218 77394591 vista28056 77439801 45210
VISTA
chr18 77401225 77406915 enh48143 77439801 32886
Spleen Thymus Large Intestine
chr18 77416323 77420703 enh44614 77439801 19098
Muscle (Myotube)
chr18 77422725 77426975 enh17830 77439801 12826
Prostate (PC-3) Placenta
chr18 77442917 77443176 vista28057 77439801 3116
VISTA
chr18 77445985 77450135 enh88362 77439801 6184
Pancreas
chr18 77479390 77479421 vista28058 77439801 39589
VISTA
chr18 77483337 77483442 vista28059 77439801 43536
VISTA
chr18 77498711 77502763 enh102588 77439801 58910
Bone (Osteoblast)
Transcript facotrs that regulate CTDP1[ENSG00000060069.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr18 77442920 77443175 RUNX3 UCSC Txn Factor no Conserved 77439801 3119 108343231
chr18 77442920 77443175 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 77439801 3119 108343232
chr18 77442936 77442949 ZBTB18 JASPAR yes 77439801 3135 42737034
chr18 77442945 77442953 EHF JASPAR yes 77439801 3144 42737035
chr18 77442947 77442954 SPIB JASPAR yes 77439801 3146 42737036
chr18 77442956 77442970 JUN JASPAR yes 77439801 3155 42737037
chr18 77442960 77442971 FOS JASPAR yes 77439801 3159 42737038
chr18 77442960 77442971 FOSL1 JASPAR yes 77439801 3159 42737039
chr18 77442960 77442971 JUND JASPAR yes 77439801 3159 42737040
chr18 77442961 77442972 FOSL2 JASPAR yes 77439801 3160 42737041
chr18 77442961 77442972 JUNB JASPAR yes 77439801 3160 42737042
chr18 77442961 77442975 JUN JASPAR yes 77439801 3160 42737043
chr18 77442966 77442981 PRDM1 JASPAR yes 77439801 3165 42737044
chr18 77442982 77443258 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 77439801 3181 108343233
chr18 77442984 77442998 SPIC JASPAR yes 77439801 3183 42737045
chr18 77442987 77442994 SPIB JASPAR yes 77439801 3186 42737046
chr18 77442989 77443010 IRF1 JASPAR yes 77439801 3188 42737047
chr18 77442990 77443005 FOXP1 JASPAR yes 77439801 3189 42737048
chr18 77442991 77443006 STAT2 JASPAR yes 77439801 3190 42737049
chr18 77442991 77443012 IRF1 JASPAR yes 77439801 3190 42737050
chr18 77442995 77443016 IRF1 JASPAR yes 77439801 3194 42737051
chr18 77443024 77443028 ESR1 TRANSFAC yes 77439801 3223 42737052
chr18 77443027 77443031 YY1 TRANSFAC yes 77439801 3226 42737053
chr18 77443028 77443039 STAT3 JASPAR yes 77439801 3227 42737054
chr18 77443033 77443046 SCRT2 JASPAR yes 77439801 3232 42737055
chr18 77443069 77443079 NKX2-3 JASPAR yes 77439801 3268 42737056
chr18 77443100 77443105 ETS2 TRANSFAC yes 77439801 3299 42737057
chr18 77443100 77443114 SPI1 JASPAR yes 77439801 3299 42737058
chr18 77443100 77443114 STAT1 JASPAR yes 77439801 3299 42737059
chr18 77443100 77443115 STAT2 JASPAR yes 77439801 3299 42737060
chr18 77443104 77443111 SPIB JASPAR yes 77439801 3303 42737061
chr18 77443142 77443155 ZBTB18 JASPAR yes 77439801 3341 42737062
chr18 77443144 77443154 FIGLA JASPAR yes 77439801 3343 42737063
chr18 77443144 77443154 ID4 JASPAR yes 77439801 3343 42737064
chr18 77443144 77443154 TCF3 JASPAR yes 77439801 3343 42737065
chr18 77443144 77443154 TCF4 JASPAR yes 77439801 3343 42737066
chr18 77443150 77443162 IRF1 JASPAR yes 77439801 3349 42737067
SNPs associated with CTDP1[ENSG00000060069.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr18 77934588 rs78561910 T C 420078 Esophagus 0.266875 5362087
chr18 77016318 rs77035817 C T 423483 Heart 0.142602 5356302
chr18 77369782 rs8096945 C T 70019 Heart 0.327154 5359701
chr18 77171938 rs7229088 T G 267863 Pancreas 0.36615 5357268
chr18 77492750 rs62097750 C T 0 Spleen 0.0270259 5360315
chr18 77439258 rs978579 A G 543 Thyroid 0.0990304 5360194
Details of CTDP1[ENSG00000060069.12]
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Genomic Location chr18:77439801-77514510[+]
TSS 77439801
Gene Name CTDP1
Ensembl ID ENSG00000060069.12
ENTREZID 9150
Uniprot
Q9Y5B0
A0A0A0MR03
Protein Name
RNA polymerase II subunit A C-terminal domain phosphatase
Expression levels of CTDP1[ENSG00000060069.12]
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