EnhancerDB
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Enhancers that regulate NDE1[ENSG00000072864.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 15639239 15647201 enh3912 15737124 89923
Cervix (HeLa-S3) Brain (SK-N-SH) Ovary Esophagus Lung (A549) Stomach Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Uterus Epithelial (MCF-7)
chr16 15655685 15659991 enh44260 15737124 77133
Bone Marrow (K562) Muscle (Myotube)
chr16 15663665 15669235 enh75759 15737124 67889
Prostate (PC-3) Cervix (HeLa-S3) Muscle (A673) Lung (PC-9) Muscle (Myoblast)
chr16 15670640 15671032 vista21985 15737124 66092
VISTA
chr16 15681336 15687555 enh75760 15737124 49569
Muscle (A673) Colon (HCT116)
chr16 15684514 15685137 vista21986 15737124 51987
VISTA
chr16 15687161 15687374 vista21987 15737124 49750
VISTA
chr16 15728425 15732575 enh107664 15737124 4549
Blood (T-cell)
chr16 15730401 15730568 vista21988 15737124 6556
VISTA
chr16 15738027 15738375 vista21989 15737124 903
VISTA
chr16 15750091 15756995 enh16574 15737124 12967
Bone Marrow (K562) Blood (OCI-LY7) Blood (GM12878) Placenta Uterus Blood (T-cell) Heart
chr16 15764785 15771135 enh109701 15737124 27661
Stomach
chr16 15766344 15766530 vista21990 15737124 29220
VISTA
chr16 15766632 15767024 vista21991 15737124 29508
VISTA
chr16 15769690 15769796 vista21992 15737124 32566
VISTA
chr16 15773966 15778288 enh31712 15737124 36842
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Muscle (A673) Lung (PC-9) Epithelial (MCF-7)
chr16 15801967 15802265 vista21993 15737124 64843
VISTA
Transcript facotrs that regulate NDE1[ENSG00000072864.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr16 15732104 15732125 IRF1 JASPAR yes 15737124 4999 9738376
chr16 15732124 15732127 MYB TRANSFAC yes 15737124 4997 9738378
chr16 15732139 15732152 ELF1 JASPAR yes 15737124 4972 9738379
chr16 15732143 15732151 FEV JASPAR yes 15737124 4973 9738380
chr16 15732169 15732180 FOSL2 JASPAR yes 15737124 4944 9738381
chr16 15732180 15732212 LUN1 TRANSFAC yes 15737124 4912 9738382
chr16 15732185 15732206 LUN1 TRANSFAC yes 15737124 4918 9738383
chr16 15732208 15732219 E2F1 JASPAR yes 15737124 4905 9738384
chr16 15732209 15732214 SP1 TRANSFAC yes 15737124 4910 9738385
chr16 15732209 15732220 E2F4 JASPAR yes 15737124 4904 9738386
chr16 15732209 15732220 E2F6 JASPAR yes 15737124 4904 9738387
chr16 15732210 15732215 SP1 TRANSFAC yes 15737124 4909 9738388
chr16 15732216 15732233 RARA JASPAR yes 15737124 4891 9738389
chr16 15732224 15732237 NR2F1 JASPAR yes 15737124 4887 9738390
chr16 15732225 15732233 CREB1 JASPAR yes 15737124 4891 9738391
chr16 15732226 15732244 RARA JASPAR yes 15737124 4880 9738392
chr16 15732228 15732232 ESR1 TRANSFAC yes 15737124 4892 9738393
chr16 15732236 15732240 ESR1 TRANSFAC yes 15737124 4884 9738394
chr16 15732254 15732266 YY1 JASPAR yes 15737124 4858 9738395
chr16 15732256 15732267 YY2 JASPAR yes 15737124 4857 9738396
chr16 15732257 15732269 HLF JASPAR yes 15737124 4855 9738397
chr16 15732275 15732290 MEF2C JASPAR yes 15737124 4834 9738398
chr16 15732276 15732291 MEF2A JASPAR yes 15737124 4833 9738399
chr16 15732277 15732289 MEF2A JASPAR yes 15737124 4835 9738400
chr16 15732277 15732289 MEF2B JASPAR yes 15737124 4835 9738401
chr16 15732277 15732289 MEF2D JASPAR yes 15737124 4835 9738402
chr16 15732289 15732308 PAX5 JASPAR yes 15737124 4816 9738403
chr16 15732299 15732319 TP63 JASPAR yes 15737124 4805 9738404
chr16 15732333 15732354 ZNF263 JASPAR yes 15737124 4770 9738405
chr16 15732375 15732392 ESR1 JASPAR yes 15737124 4732 9738406
chr16 15732415 15732434 PAX5 JASPAR yes 15737124 4690 9738407
chr16 15732439 15732454 FOXP1 JASPAR yes 15737124 4670 9738408
chr16 15732439 15732460 IRF1 JASPAR yes 15737124 4664 9738409
chr16 15732440 15732455 FOXP1 JASPAR yes 15737124 4669 9738410
chr16 15732442 15732457 FOXP1 JASPAR yes 15737124 4667 9738411
chr16 15732443 15732464 IRF1 JASPAR yes 15737124 4660 9738412
chr16 15732444 15732459 FOXP1 JASPAR yes 15737124 4665 9738413
chr16 15732445 15732466 IRF1 JASPAR yes 15737124 4658 9738414
chr16 15732447 15732461 STAT1 JASPAR yes 15737124 4663 9738415
chr16 15732447 15732462 PRDM1 JASPAR yes 15737124 4662 9738416
chr16 15732469 15732480 BATF JASPAR yes 15737124 4644 9738417
chr16 15732469 15732483 SPIC JASPAR yes 15737124 4641 9738418
chr16 15732470 15732481 JUNB JASPAR yes 15737124 4643 9738419
chr16 15732471 15732482 FOS JASPAR yes 15737124 4642 9738420
chr16 15732472 15732483 NFE2L2 JASPAR yes 15737124 4641 9738421
chr16 15732473 15732479 JUN TRANSFAC yes 15737124 4645 9738422
chr16 15732510 15732526 POU4F2 JASPAR yes 15737124 4598 9738423
chr16 15732511 15732522 FOXB1 JASPAR yes 15737124 4602 9738424
chr16 15732511 15732522 FOXC1 JASPAR yes 15737124 4602 9738425
chr16 15732530 15732545 MEF2C JASPAR yes 15737124 4579 9738426
chr16 15732531 15732546 MEF2A JASPAR yes 15737124 4578 9738427
chr16 15732540 15732546 TBP TRANSFAC yes 15737124 4578 9738428
chr16 15732542 15732556 SPI1 JASPAR yes 15737124 4568 9738429
chr16 15732542 15732556 SPIC JASPAR yes 15737124 4568 9738430
chr16 15732553 15732559 ZNF354C JASPAR yes 15737124 4565 9738431
chr16 15732555 15732560 GATA2 JASPAR yes 15737124 4564 9738432
chr16 15737754 15738034 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 15737124 630 108184862
chr16 15737760 15738036 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 15737124 636 108184863
chr16 15737933 15738590 POLR2A UCSC Txn Factor no Conserved 15737124 809 108184864
chr16 15738012 15738314 ZNF274 GTRD no Liver (HepG2) 15737124 888 108184865
chr16 15738042 15738402 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 15737124 918 108184866
chr16 15738043 15738058 MEF2A JASPAR yes 15737124 919 49347992
chr16 15738044 15738059 MEF2C JASPAR yes 15737124 920 49347993
chr16 15738045 15738057 MEF2A JASPAR yes 15737124 921 49347994
chr16 15738045 15738057 MEF2B JASPAR yes 15737124 921 49347995
chr16 15738045 15738057 MEF2D JASPAR yes 15737124 921 49347996
chr16 15738046 15738056 MEF2A JASPAR yes 15737124 922 49347997
chr16 15738047 15738051 YY1 TRANSFAC yes 15737124 923 49347998
chr16 15738053 15738393 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 15737124 929 108184867
chr16 15738057 15738072 STAT1 JASPAR yes 15737124 933 49347999
chr16 15738065 15738521 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 15737124 941 108184868
chr16 15738075 15738365 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 15737124 951 108184869
chr16 15738075 15738392 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 15737124 951 108184870
chr16 15738087 15738101 SPIC JASPAR yes 15737124 963 49348000
chr16 15738100 15738416 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 15737124 976 108184871
chr16 15738106 15738112 NFIC JASPAR yes 15737124 982 49348001
chr16 15738119 15738123 YY1 TRANSFAC yes 15737124 995 49348002
chr16 15738128 15738146 NR3C1 JASPAR yes 15737124 1004 49348003
chr16 15738138 15738152 GLIS3 JASPAR yes 15737124 1014 49348004
chr16 15738138 15738294 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 15737124 1014 108184872
chr16 15738138 15738417 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 15737124 1014 108184873
chr16 15738151 15738155 YY1 TRANSFAC yes 15737124 1027 49348005
chr16 15738166 15738172 MZF1 JASPAR yes 15737124 1042 49348006
chr16 15738170 15738174 YY1 TRANSFAC yes 15737124 1046 49348007
chr16 15738177 15738182 TFAP2A TRANSFAC yes 15737124 1053 49348008
chr16 15738177 15738183 MZF1 JASPAR yes 15737124 1053 49348009
chr16 15738178 15738188 GSC2 JASPAR yes 15737124 1054 49348010
chr16 15738178 15738188 GSC JASPAR yes 15737124 1054 49348011
chr16 15738179 15738187 OTX1 JASPAR yes 15737124 1055 49348012
chr16 15738179 15738187 OTX2 JASPAR yes 15737124 1055 49348013
chr16 15738179 15738187 RHOXF1 JASPAR yes 15737124 1055 49348014
chr16 15738179 15738188 PITX3 JASPAR yes 15737124 1055 49348015
chr16 15738182 15738202 TBX19 JASPAR yes 15737124 1058 49348016
chr16 15738184 15738187 MYB TRANSFAC yes 15737124 1060 49348017
chr16 15738184 15738200 T JASPAR yes 15737124 1060 49348018
chr16 15738194 15738454 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 15737124 1070 108184874
chr16 15738195 15738203 FOXO3 JASPAR yes 15737124 1071 49348019
chr16 15738196 15738203 FOXD2 JASPAR yes 15737124 1072 49348020
chr16 15738196 15738203 FOXI1 JASPAR yes 15737124 1072 49348021
chr16 15738196 15738203 FOXL1 JASPAR yes 15737124 1072 49348022
chr16 15738196 15738203 FOXO4 JASPAR yes 15737124 1072 49348023
chr16 15738196 15738203 FOXO6 JASPAR yes 15737124 1072 49348024
chr16 15738196 15738203 FOXP3 JASPAR yes 15737124 1072 49348025
chr16 15738196 15738204 FOXD1 JASPAR yes 15737124 1072 49348026
chr16 15738196 15738204 FOXG1 JASPAR yes 15737124 1072 49348027
chr16 15738196 15738204 FOXO3 JASPAR yes 15737124 1072 49348028
chr16 15738224 15738244 TP53 JASPAR yes 15737124 1100 49348029
chr16 15738226 15738230 LFA1 TRANSFAC yes 15737124 1102 49348030
chr16 15738226 15738246 TP63 JASPAR yes 15737124 1102 49348031
chr16 15738227 15738245 TP53 JASPAR yes 15737124 1103 49348032
chr16 15738227 15738245 TP73 JASPAR yes 15737124 1103 49348033
chr16 15738228 15738243 TP53 JASPAR yes 15737124 1104 49348034
chr16 15738256 15738262 SOX10 JASPAR yes 15737124 1132 49348035
chr16 15738267 15738271 YY1 TRANSFAC yes 15737124 1143 49348036
chr16 15738271 15738284 HSF1 JASPAR yes 15737124 1147 49348037
chr16 15738271 15738284 HSF2 JASPAR yes 15737124 1147 49348038
chr16 15738271 15738284 HSF4 JASPAR yes 15737124 1147 49348039
chr16 15738273 15738283 NFATC3 JASPAR yes 15737124 1149 49348040
chr16 15738274 15738281 NFATC2 JASPAR yes 15737124 1150 49348041
chr16 15738274 15738285 STAT3 JASPAR yes 15737124 1150 49348042
chr16 15738317 15738329 FOXI1 JASPAR yes 15737124 1193 49348043
chr16 15738320 15738324 YY1 TRANSFAC yes 15737124 1196 49348044
chr16 15738320 15738331 HOXA10 JASPAR yes 15737124 1196 49348045
chr16 15738321 15738330 CDX1 JASPAR yes 15737124 1197 49348046
chr16 15738321 15738332 CDX2 JASPAR yes 15737124 1197 49348047
chr16 15738324 15738342 MAFF JASPAR yes 15737124 1200 49348048
chr16 15738326 15738337 NRL JASPAR yes 15737124 1202 49348049
chr16 15738326 15738341 MAFK JASPAR yes 15737124 1202 49348050
chr16 15738349 15738359 SP1 JASPAR yes 15737124 1225 49348051
SNPs associated with NDE1[ENSG00000072864.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of NDE1[ENSG00000072864.8]
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Genomic Location chr16:15737124-15820210[+]
TSS 15737124
Gene Name NDE1
Ensembl ID ENSG00000072864.8
ENTREZID 54820
Uniprot
X5DP35
X5DR54
Q9NXR1
Protein Name
Alternative protein NDE1
Nuclear distribution protein nudE homolog 1
NudE neurodevelopment protein 1 isoform A
NudE neurodevelopment protein 1 isoform B
NudE neurodevelopment protein 1 isoform C
NudE neurodevelopment protein 1 isoform D
Expression levels of NDE1[ENSG00000072864.8]
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