EnhancerDB

Enhancers that regulate PALB2[ENSG00000083093.5]

Back to top

Chrom.	Start	End	Enhancer ID	TSS of gene	Distance between enhancer and TSS	Tissues that enhancer appears	More
chr16	23546885	23554126	enh31736	23652631	98505	Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Lung (A549) Muscle (A673) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
chr16	23679365	23683879	enh3946	23652631	26734	Prostate (PC-3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube)
chr16	23693851	23693869	vista22166	23652631	41220	VISTA
chr16	23737165	23743355	enh69083	23652631	84534	Bone Marrow (K562) Epithelial (MCF-7) Brain (SK-N-MC) Muscle (A673) Neural Stem Cells (H9) Stomach
chr16	23744625	23750815	enh75763	23652631	91994	Muscle (A673) Brain (SK-N-MC)

Transcript facotrs that regulate PALB2[ENSG00000083093.5]

Back to top

Chrom.	Start	End	TF name	Source	Predicted site?	Tissue	TSS of gene	Distance between TFBS and gene	id	More

Chrom.	Position	dbSNP ID	Reference Allele	Alternative Allele	Distance between TSS and SNP	Tissue	q Value	id	More
chr16	22958684	rs1503949	T	C	655804	Esophagus	0.28272	4373170
chr16	23783001	rs9935512	G	A	130370	Heart	0.202448	4376599
chr16	23869640	rs113102662	T	TCCCAGA	217009	Spleen	0.0858876	4377541
chr16	24302447	rs62029009	T	C	649816	Uterus	0.280521	4380597
chr16	23809599	rs9941276	T	C	156968	Thyroid	0.039495	4376899
chr16	23979151	rs36121434	T	A	326520	Liver	0.447103	4378707
chr16	22695548	rs368668801	G	A	918940	Stomach	0.158889	4372321
chr16	22960332	rs118102542	A	G	654156	Adrenal	0.397974	4373191

Genomic Location	chr16:23614488-23652631[-]
TSS	23652631
Gene Name	PALB2
Ensembl ID	ENSG00000083093.5
ENTREZID	79728
Uniprot
	H3BN63
	Q86YC2
Protein Name
Protein Name	Partner and localizer of BRCA2