EnhancerDB

Enhancers that regulate ATG16L1[ENSG00000085978.17]

Chrom.	Start	End	Enhancer ID	TSS of gene	Distance between enhancer and TSS	Tissues that enhancer appears
chr2	234059305	234064080	enh65413	234118697	54617	Heart
chr2	234068854	234069213	vista35216	234118697	49484	VISTA
chr2	234069745	234076835	enh76607	234118697	41862	Muscle (A673)
chr2	234074569	234074943	vista35217	234118697	43754	VISTA
chr2	234105765	234112680	enh6213	234118697	6017	Blood (Karpas-422) Blood (GM12878)
chr2	234119915	234120170	vista35218	234118697	1218	VISTA
chr2	234124585	234145135	enh60917	234118697	5888	Bone Marrow (K562) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (T-cell)
chr2	234139282	234139520	vista35219	234118697	20585	VISTA
chr2	234139975	234140056	vista35220	234118697	21278	VISTA
chr2	234147285	234162255	enh48435	234118697	28588	Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Uterus Thymus Epithelial (MCF-7)
chr2	234156397	234156705	vista35221	234118697	37700	VISTA
chr2	234167065	234171215	enh109931	234118697	48368	Stomach
chr2	234192625	234196815	enh34403	234118697	73928	Astrocyte Thyroid

Transcript facotrs that regulate ATG16L1[ENSG00000085978.17]

Chrom.	Start	End	TF name	Source	Predicted site?	Tissue	TSS of gene	Distance between TFBS and gene	id
chr2	234119855	234120144	PRDM1	UCSC Txn Factor	no	Conserved	234118697	1158	108435796
chr2	234119917	234119927	ZNF740	JASPAR	yes		234118697	1220	22232296
chr2	234119918	234119928	ZNF740	JASPAR	yes		234118697	1221	22232297
chr2	234119919	234119940	ZNF263	JASPAR	yes		234118697	1222	22232298
chr2	234119928	234119949	ZNF263	JASPAR	yes		234118697	1231	22232299
chr2	234119934	234119955	ZNF263	JASPAR	yes		234118697	1237	22232300
chr2	234119964	234119985	ZNF263	JASPAR	yes		234118697	1267	22232301
chr2	234119970	234119991	IRF1	JASPAR	yes		234118697	1273	22232302
chr2	234119972	234119987	IRF9	JASPAR	yes		234118697	1275	22232303
chr2	234119973	234119987	IRF7	JASPAR	yes		234118697	1276	22232304
chr2	234119973	234119987	IRF8	JASPAR	yes		234118697	1276	22232305
chr2	234119974	234119988	STAT1	JASPAR	yes		234118697	1277	22232306
chr2	234119974	234119989	PRDM1	JASPAR	yes		234118697	1277	22232307
chr2	234119974	234119989	STAT2	JASPAR	yes		234118697	1277	22232308
chr2	234119974	234119992	IRF2	JASPAR	yes		234118697	1277	22232309
chr2	234119975	234119987	IRF1	JASPAR	yes		234118697	1278	22232310
chr2	234120013	234120027	PLAG1	JASPAR	yes		234118697	1316	22232311
chr2	234120018	234120030	TGIF2	JASPAR	yes		234118697	1321	22232312
chr2	234120020	234120038	ESR1	JASPAR	yes		234118697	1323	22232313
chr2	234120025	234120039	TLX1	JASPAR	yes		234118697	1328	22232314
chr2	234120061	234120082	ZNF263	JASPAR	yes		234118697	1364	22232315
chr2	234120062	234120083	ZNF263	JASPAR	yes		234118697	1365	22232316
chr2	234120065	234120086	ZNF263	JASPAR	yes		234118697	1368	22232317
chr2	234120066	234120071	ETS2	TRANSFAC	yes		234118697	1369	22232318
chr2	234120066	234120074	EHF	JASPAR	yes		234118697	1369	22232319
chr2	234120077	234120098	ZNF263	JASPAR	yes		234118697	1380	22232320
chr2	234120083	234120096	ELF1	JASPAR	yes		234118697	1386	22232321
chr2	234120085	234120090	SP1	TRANSFAC	yes		234118697	1388	22232322
chr2	234120086	234120096	GABPA	JASPAR	yes		234118697	1389	22232323
chr2	234120086	234120097	ELK4	JASPAR	yes		234118697	1389	22232324
chr2	234120088	234120094	ETS1	JASPAR	yes		234118697	1391	22232325
chr2	234120088	234120094	SPI1	JASPAR	yes		234118697	1391	22232326
chr2	234120090	234120105	AR	JASPAR	yes		234118697	1393	22232327
chr2	234120097	234120101	NFE	TRANSFAC	yes		234118697	1400	22232328
chr2	234120107	234120127	TP63	JASPAR	yes		234118697	1410	22232329
chr2	234120112	234120123	FOXH1	JASPAR	yes		234118697	1415	22232330
chr2	234120116	234120128	GRHL1	JASPAR	yes		234118697	1419	22232331
chr2	234120136	234120143	GATA1	TRANSFAC	yes		234118697	1439	22232332
chr2	234120137	234120149	MEF2A	JASPAR	yes		234118697	1440	22232333
chr2	234120137	234120149	MEF2B	JASPAR	yes		234118697	1440	22232334
chr2	234120139	234120143	TEAD2	TRANSFAC	yes		234118697	1442	22232335
chr2	234120139	234120144	TBP	TRANSFAC	yes		234118697	1442	22232336
chr2	234120139	234120145	TMF	TRANSFAC	yes		234118697	1442	22232337
chr2	234120142	234120153	PHOX2A	JASPAR	yes		234118697	1445	22232338
chr2	234120142	234120153	PROP1	JASPAR	yes		234118697	1445	22232339
chr2	234120144	234120149	MYB	TRANSFAC	yes		234118697	1447	22232340
chr2	234120145	234120155	RELA	JASPAR	yes		234118697	1448	22232341
chr2	234120156	234120168	SRF	JASPAR	yes		234118697	1459	22232342
chr2	234120161	234120165	YY1	TRANSFAC	yes		234118697	1464	22232343

Chrom.	Position	dbSNP ID	Reference Allele	Alternative Allele	Distance between TSS and SNP	Tissue	q Value	id
chr2	234151615	rs10186850	C	A,G	0	Esophagus	1.732e-14	6446313
chr2	233459088	rs1467325	C	T	659609	Esophagus	0.359519	6442362
chr2	235006189	rs111570261	C	T	801869	Heart	0.322913	6449297
chr2	233499790	rs4378795	G	A	618907	Spleen	0.195875	6442753
chr2	234157688	rs56049444	C	T	0	Thyroid	7.5457e-06	6446414
chr2	234156536	rs11679791	G	C,T	0	Liver	0.167377	6446398
chr2	234154651	rs2119505	G	A	0	Stomach	0.000117098	6446369

Genomic Location	chr2:234118697-234204320[+]
TSS	234118697
Gene Name	ATG16L1
Ensembl ID	ENSG00000085978.17
ENTREZID	55054
Uniprot
	A0A024R4B6
	E7EVC7
	Q17RG0
	A0A024R494
	Q676U5
	Q53SV2
Protein Name
	ATG16 autophagy related 16-like 1
	ATG16L1 protein
	Autophagy-related protein 16-1
	Autophagy-related protein 16-1 isoform 2

EnhancerDB

Enhancers that regulate ATG16L1[ENSG00000085978.17]

Transcript facotrs that regulate ATG16L1[ENSG00000085978.17]

SNPs associated with ATG16L1[ENSG00000085978.17], confirmed by eQTL

Details of ATG16L1[ENSG00000085978.17]

Expression levels of ATG16L1[ENSG00000085978.17]