EnhancerDB
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Enhancers that regulate USP48[ENSG00000090686.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 22024745 22028895 enh103005 22110099 81204
Peripheral Blood (MM.1S)
chr1 22065805 22069955 enh111362 22110099 40144
Brain (SK-N-MC)
chr1 22066009 22066225 vista689 22110099 43874
VISTA
chr1 22076024 22076450 vista690 22110099 33649
VISTA
chr1 22085704 22097055 enh115 22110099 13044
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 22089036 22089375 vista691 22110099 20724
VISTA
chr1 22098165 22104815 enh95836 22110099 5284
Stomach Peripheral Blood (MM.1S) Blood (T-cell) Epithelial (MCF-7)
chr1 22106565 22106957 vista692 22110099 3142
VISTA
chr1 22116205 22120375 enh90655 22110099 6106
Bone Marrow (K562) Peripheral Blood (MM.1S) Stomach
chr1 22122465 22133295 enh11592 22110099 12366
Prostate (PC-3) Placenta Peripheral Blood (MM.1S) Lung (PC-9)
chr1 22141585 22147646 enh49678 22110099 31486
Prostate (RWPE1) Large Intestine
chr1 22183905 22188101 enh102369 22110099 73806
Bone (Osteoblast)
chr1 22184381 22184621 vista693 22110099 74282
VISTA
chr1 22190565 22195075 enh109298 22110099 80466
Stomach
Transcript facotrs that regulate USP48[ENSG00000090686.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 22096027 22107716 ZNF274 GTRD no Blood (GM12878) 22110099 2383 107802374
chr1 22106591 22106603 POU2F1 JASPAR yes 22110099 3496 118247165
chr1 22106591 22106604 POU3F3 JASPAR yes 22110099 3495 118247166
chr1 22106591 22106605 POU1F1 JASPAR yes 22110099 3494 118247167
chr1 22106592 22106604 POU3F1 JASPAR yes 22110099 3495 118247168
chr1 22106592 22106604 POU3F2 JASPAR yes 22110099 3495 118247169
chr1 22106592 22106605 POU2F2 JASPAR yes 22110099 3494 118247170
chr1 22106593 22106601 POU2F1 TRANSFAC yes 22110099 3498 118247171
chr1 22106593 22106602 POU3F4 JASPAR yes 22110099 3497 118247172
chr1 22106593 22106602 POU5F1B JASPAR yes 22110099 3497 118247173
chr1 22106594 22106601 POU2F1 TRANSFAC yes 22110099 3498 118247174
chr1 22106594 22106601 POU2F2 TRANSFAC yes 22110099 3498 118247175
chr1 22106626 22106639 SCRT2 JASPAR yes 22110099 3460 118247176
chr1 22106626 22106641 SCRT1 JASPAR yes 22110099 3458 118247177
chr1 22106639 22106653 ONECUT2 JASPAR yes 22110099 3446 118247178
chr1 22106639 22106653 ONECUT3 JASPAR yes 22110099 3446 118247179
chr1 22106643 22106658 AR JASPAR yes 22110099 3441 118247180
chr1 22106675 22106679 TEAD2 TRANSFAC yes 22110099 3420 118247181
chr1 22106675 22106680 TBP TRANSFAC yes 22110099 3419 118247182
chr1 22106675 22106681 TFIID TRANSFAC yes 22110099 3418 118247183
chr1 22106679 22106690 RUNX1 JASPAR yes 22110099 3409 118247184
chr1 22106690 22106695 GATA2 JASPAR yes 22110099 3404 118247185
chr1 22106720 22106725 ETS2 TRANSFAC yes 22110099 3374 118247186
chr1 22106728 22106742 JUN JASPAR yes 22110099 3357 118247187
chr1 22106736 22106747 NRF1 JASPAR yes 22110099 3352 118247188
chr1 22106751 22106756 GATA2 JASPAR yes 22110099 3343 118247189
chr1 22106754 22106757 MYB TRANSFAC yes 22110099 3342 118247190
chr1 22106754 22106768 NR2F1 JASPAR yes 22110099 3331 118247191
chr1 22106761 22106769 FOXO3 JASPAR yes 22110099 3330 118247192
chr1 22106767 22106771 YY1 TRANSFAC yes 22110099 3328 118247193
chr1 22106773 22106791 IRF2 JASPAR yes 22110099 3308 118247194
chr1 22106808 22106812 TEAD2 TRANSFAC yes 22110099 3287 118247195
chr1 22106808 22106823 SOX21 JASPAR yes 22110099 3276 118247196
chr1 22106820 22106836 POU4F3 JASPAR yes 22110099 3263 118247197
chr1 22106822 22106836 POU4F1 JASPAR yes 22110099 3263 118247198
chr1 22106823 22106835 HNF1B JASPAR yes 22110099 3264 118247199
chr1 22106823 22106837 POU4F1 JASPAR yes 22110099 3262 118247200
chr1 22106823 22106839 POU4F3 JASPAR yes 22110099 3260 118247201
chr1 22106827 22106839 MEF2A JASPAR yes 22110099 3260 118247202
chr1 22106827 22106839 MEF2B JASPAR yes 22110099 3260 118247203
chr1 22106827 22106839 MEF2D JASPAR yes 22110099 3260 118247204
chr1 22106828 22106838 MEF2A JASPAR yes 22110099 3261 118247205
chr1 22106836 22106851 HSF1 JASPAR yes 22110099 3248 118247206
chr1 22106842 22106863 IRF1 JASPAR yes 22110099 3236 118247207
chr1 22106865 22106880 RFX5 JASPAR yes 22110099 3219 118247208
chr1 22106866 22106871 MYC TRANSFAC yes 22110099 3228 118247209
chr1 22106869 22106884 TFAP2C JASPAR yes 22110099 3215 118247210
chr1 22106870 22106882 INSM1 JASPAR yes 22110099 3217 118247211
chr1 22106874 22106895 ZNF263 JASPAR yes 22110099 3204 118247212
chr1 22106875 22106896 ZNF263 JASPAR yes 22110099 3203 118247213
chr1 22106884 22106894 MZF1 JASPAR yes 22110099 3205 118247214
chr1 22106888 22106902 PLAG1 JASPAR yes 22110099 3197 118247215
chr1 22106892 22106906 SPI1 JASPAR yes 22110099 3193 118247216
chr1 22106892 22106906 SPIC JASPAR yes 22110099 3193 118247217
chr1 22106892 22106907 STAT2 JASPAR yes 22110099 3192 118247218
chr1 22106898 22106903 ETS2 TRANSFAC yes 22110099 3196 118247219
chr1 22106898 22106912 JUN JASPAR yes 22110099 3187 118247220
chr1 22106903 22106910 JUN TRANSFAC yes 22110099 3189 118247221
chr1 22106908 22106911 MYB TRANSFAC yes 22110099 3188 118247222
chr1 22106909 22106919 NEUROG2 JASPAR yes 22110099 3180 118247223
chr1 22106918 22106933 STAT2 JASPAR yes 22110099 3166 118247224
chr1 22106919 22106933 STAT1 JASPAR yes 22110099 3166 118247225
chr1 22106920 22106934 IRF7 JASPAR yes 22110099 3165 118247226
chr1 22106922 22106940 SRF JASPAR yes 22110099 3159 118247227
chr1 22106923 22106928 ETS2 TRANSFAC yes 22110099 3171 118247228
chr1 22106932 22106937 GATA2 JASPAR yes 22110099 3162 118247229
chr1 22106932 22106950 IRF2 JASPAR yes 22110099 3149 118247230
chr1 22106939 22106954 HSF1 JASPAR yes 22110099 3145 118247231
chr1 22106940 22106953 HSF1 JASPAR yes 22110099 3146 118247232
chr1 22106940 22106953 HSF2 JASPAR yes 22110099 3146 118247233
chr1 22106940 22106953 HSF4 JASPAR yes 22110099 3146 118247234
SNPs associated with USP48[ENSG00000090686.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 22068992 rs333175 G A,C 0 Esophagus 0.00544455 146175
chr1 22090256 rs7548795 C T 0 Heart 0.0723335 146260
chr1 22100963 rs10753519 C T 0 Breast 0.00606374 146408
chr1 22088841 rs6667223 G A 0 Spleen 0.0147555 146238
chr1 22685034 rs35158109 G T 574935 Uterus 0.201425 151639
chr1 22130705 rs398049155 AT A 20606 Thyroid 7.54248e-32 146782
chr1 22352179 rs1883422 A C,T 242080 Liver 0.316696 148378
chr1 22088841 rs6667223 G A 0 Adrenal 0.00143315 146238
Details of USP48[ENSG00000090686.11]
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Genomic Location chr1:22004791-22110099[-]
TSS 22110099
Gene Name USP48
Ensembl ID ENSG00000090686.11
ENTREZID 84196
Uniprot
Q86UV5
Protein Name
USP48 protein
Ubiquitin carboxyl-terminal hydrolase 48
Ubiquitin specific peptidase 48
Expression levels of USP48[ENSG00000090686.11]
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