EnhancerDB
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Enhancers that regulate GNPNAT1[ENSG00000100522.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr14 53155925 53161277 enh62400 53258386 97109
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Esophagus Blood (T-cell) Stomach
chr14 53198645 53211455 enh3192 53258386 46931
Prostate (PC-3) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (Karpas-422) Neural Stem Cells (H9) Thymus Stomach
chr14 53209302 53209454 vista17781 53258386 48932
VISTA
chr14 53257268 53257587 vista17782 53258386 799
VISTA
chr14 53265885 53271803 enh30882 53258386 7499
Prostate (PC-3) Liver (HepG2) Astrocyte Bone (Osteoblast) Muscle (Myoblast) Spleen
chr14 53269343 53269708 vista17783 53258386 10957
VISTA
chr14 53272945 53277095 enh92532 53258386 14559
Liver (HepG2)
chr14 53286545 53292515 enh92533 53258386 28159
Liver (HepG2)
chr14 53294197 53294464 vista17784 53258386 35811
VISTA
chr14 53294565 53305315 enh15614 53258386 36179
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr14 53302326 53302477 vista17785 53258386 43940
VISTA
chr14 53305633 53322072 enh15615 53258386 47247
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Bone (Osteoblast) Muscle (A673) Placenta Uterus Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
chr14 53322931 53323139 vista17786 53258386 64545
VISTA
chr14 53331985 53336135 enh51814 53258386 73599
Large Intestine
chr14 53352465 53356615 enh15616 53258386 94079
Placenta
Transcript facotrs that regulate GNPNAT1[ENSG00000100522.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr14 53257269 53257274 USF2 TRANSFAC yes 53258386 1112 107549343
chr14 53257300 53257303 MYB TRANSFAC yes 53258386 1083 107549344
chr14 53257377 53257381 H1TF2 TRANSFAC yes 53258386 1005 107549345
chr14 53257377 53257381 NFE TRANSFAC yes 53258386 1005 107549346
chr14 53257377 53257381 SRF TRANSFAC yes 53258386 1005 107549347
chr14 53257382 53257397 JUND JASPAR yes 53258386 989 107549348
chr14 53257383 53257396 JUN JASPAR yes 53258386 990 107549349
chr14 53257391 53257401 SREBF2 JASPAR yes 53258386 985 107549350
chr14 53257415 53257433 SRF JASPAR yes 53258386 953 107549351
chr14 53257421 53257425 YY1 TRANSFAC yes 53258386 961 107549352
chr14 53257439 53257450 PHOX2A JASPAR yes 53258386 936 107549353
chr14 53257439 53257450 PROP1 JASPAR yes 53258386 936 107549354
chr14 53257440 53257450 PAX3 JASPAR yes 53258386 936 107549355
chr14 53257440 53257450 PAX7 JASPAR yes 53258386 936 107549356
chr14 53257479 53257489 GSC JASPAR yes 53258386 897 107549357
chr14 53257480 53257488 RHOXF1 JASPAR yes 53258386 898 107549358
chr14 53257480 53257489 PITX3 JASPAR yes 53258386 897 107549359
chr14 53257482 53258018 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 53258386 368 108102415
chr14 53257485 53257490 GATA2 JASPAR yes 53258386 896 107549360
chr14 53257490 53257493 MYB TRANSFAC yes 53258386 893 107549361
chr14 53257502 53257878 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 53258386 508 108102416
chr14 53257505 53257509 TEAD2 TRANSFAC yes 53258386 877 107549362
chr14 53257525 53257538 POU3F3 JASPAR yes 53258386 848 107549363
chr14 53257526 53257538 POU3F1 JASPAR yes 53258386 848 107549364
chr14 53257526 53257538 POU3F2 JASPAR yes 53258386 848 107549365
chr14 53257526 53257539 POU2F2 JASPAR yes 53258386 847 107549366
chr14 53257530 53257546 POU4F2 JASPAR yes 53258386 840 107549367
chr14 53257535 53258195 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 53258386 191 108102417
chr14 53257549 53257560 NFIL3 JASPAR yes 53258386 826 107549368
chr14 53257550 53257562 HLF JASPAR yes 53258386 824 107549369
chr14 53257551 53257565 FOXF2 JASPAR yes 53258386 821 107549370
chr14 53257553 53257564 FOXC1 JASPAR yes 53258386 822 107549371
chr14 53257553 53257565 FOXC2 JASPAR yes 53258386 821 107549372
chr14 53257554 53257566 FOXI1 JASPAR yes 53258386 820 107549373
chr14 53257556 53257564 FOXG1 JASPAR yes 53258386 822 107549374
chr14 53257564 53258288 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 53258386 98 108102418
SNPs associated with GNPNAT1[ENSG00000100522.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr14 53479443 rs28507958 T A 221057 Heart 0.146057 3545278
chr14 53932249 rs149067504 G T 673863 Pancreas 0.243428 3548091
chr14 52641562 rs112559531 C T 600350 Breast 0.463855 3541267
chr14 53371863 rs62003535 C A,T 113477 Ovary 0.37704 3544402
chr14 52746411 rs74049581 T A 495501 Uterus 0.327252 3541722
chr14 52497718 rs12894295 G A 744194 Thyroid 0.0846488 3540004
chr14 53274260 rs78459273 G A 15874 Adrenal 0.1498 3543615
Details of GNPNAT1[ENSG00000100522.4]
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Genomic Location chr14:53241912-53258386[-]
TSS 53258386
Gene Name GNPNAT1
Ensembl ID ENSG00000100522.4
ENTREZID 64841
Uniprot
Q96EK6
A0A024R649
Protein Name
isoform CRA_a
Glucosamine 6-phosphate N-acetyltransferase
Glucosamine-phosphate N-acetyltransferase 1
Expression levels of GNPNAT1[ENSG00000100522.4]
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