EnhancerDB
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Enhancers that regulate SIX4[ENSG00000100625.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr14 61087185 61094323 enh102498 61191066 96743
Bone (Osteoblast) Stomach
chr14 61097085 61107302 enh75495 61191066 83764
Muscle (Myoblast) Muscle (A673) Peripheral Blood (MM.1S) Brain (SK-N-MC)
chr14 61108188 61108290 vista17976 61191066 82776
VISTA
chr14 61120199 61122451 vista467 61191066 68615
VISTA
chr14 61122184 61122613 vista17977 61191066 68453
VISTA
chr14 61144006 61148553 enh68749 61191066 42513
Neural Stem Cells (H9)
chr14 61151725 61155895 enh96519 61191066 35171
Lung (PC-9) Epithelial (MCF-7)
chr14 61156125 61160275 enh92543 61191066 30791
Liver (HepG2)
chr14 61188145 61188381 vista17978 61191066 2685
VISTA
chr14 61188472 61188761 vista17979 61191066 2305
VISTA
chr14 61209293 61213701 enh58580 61191066 18227
Skin (Keratinocyte)
chr14 61213785 61219615 enh3235 61191066 22719
Blood (Karpas-422)
chr14 61221652 61230555 enh3236 61191066 30586
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
chr14 61233425 61247089 enh3237 61191066 42359
Prostate (PC-3) Astrocyte Bone (Osteoblast) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube)
chr14 61255685 61259835 enh92544 61191066 64619
Liver (HepG2)
chr14 61270745 61274935 enh80845 61191066 79679
Prostate (PC-3) Cervix (HeLa-S3)
chr14 61280058 61284895 enh3238 61191066 88992
Blood (OCI-LY7) Liver (HepG2) Blood (Karpas-422)
chr14 61289765 61293915 enh112332 61191066 98699
Brain (SK-N-MC)
Transcript facotrs that regulate SIX4[ENSG00000100625.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr14 61187878 61188394 TCF7L2 UCSC Txn Factor no Conserved 61191066 2672 108105290
chr14 61187911 61188414 ZNF143 GTRD no Epithelial (MCF-7) 61191066 2652 108105291
chr14 61187992 61190020 ZBTB33 GTRD no Lung (A549) 61191066 1046 108105292
chr14 61187992 61190020 ZBTB33 GTRD no Lung (A549) 61191066 1046 108105293
chr14 61187996 61188355 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 61191066 2711 108105294
chr14 61188033 61188636 P63 GTRD no Skin (Keratinocyte) 61191066 2430 108105295
chr14 61188033 61188636 P63 GTRD no Skin (Keratinocyte) 61191066 2430 108105296
chr14 61188119 61188395 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 61191066 2671 108105297
chr14 61188130 61188729 TCF7L2 GTRD no Colon (HCT116) 61191066 2337 108105298
chr14 61188130 61188729 TCF7L2 GTRD no Colon (HCT116) 61191066 2337 108105299
chr14 61188137 61188879 ZNF143 GTRD no Epithelial (MCF-7) 61191066 2187 108105300
chr14 61188137 61188879 ZNF143 GTRD no Epithelial (MCF-7) 61191066 2187 108105301
chr14 61188143 61188883 ZNF143 GTRD no Epithelial (MCF-7) 61191066 2183 108105302
chr14 61188143 61188883 ZNF143 GTRD no Epithelial (MCF-7) 61191066 2183 108105303
chr14 61188145 61188159 TCF7L2 JASPAR yes 61191066 2907 107558489
chr14 61188148 61188349 FOSL2 UCSC Txn Factor no Conserved 61191066 2717 108105304
chr14 61188148 61188349 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 61191066 2717 108105305
chr14 61188156 61188578 TCF7L2 GTRD no Colon (HCT116) 61191066 2488 108105306
chr14 61188156 61188578 TCF7L2 GTRD no Colon (HCT116) 61191066 2488 108105307
chr14 61188156 61189350 TCF7L2 GTRD no Colon (HCT116) 61191066 1716 108105308
chr14 61188156 61189350 TCF7L2 GTRD no Colon (HCT116) 61191066 1716 108105309
chr14 61188159 61188169 SP1 JASPAR yes 61191066 2897 107558490
chr14 61188160 61188169 SP1 TRANSFAC yes 61191066 2897 107558491
chr14 61188161 61188167 MAZ TRANSFAC yes 61191066 2899 107558492
chr14 61188164 61188177 NFKB1 JASPAR yes 61191066 2889 107558493
chr14 61188164 61188177 NFKB2 JASPAR yes 61191066 2889 107558494
chr14 61188165 61188175 GSC JASPAR yes 61191066 2891 107558495
chr14 61188165 61188175 NFKB1 JASPAR yes 61191066 2891 107558496
chr14 61188165 61188175 REL JASPAR yes 61191066 2891 107558497
chr14 61188172 61188724 TCF7L2 GTRD no Colon (HCT116) 61191066 2342 108105310
chr14 61188172 61188724 TCF7L2 GTRD no Colon (HCT116) 61191066 2342 108105311
chr14 61188190 61188195 SP1 TRANSFAC yes 61191066 2871 107558498
chr14 61188209 61188629 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 61191066 2437 108105312
chr14 61188209 61188629 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 61191066 2437 108105313
chr14 61188212 61188218 LEF1 TRANSFAC yes 61191066 2848 107558499
chr14 61188212 61188218 TCF4 TRANSFAC yes 61191066 2848 107558500
chr14 61188216 61188227 HOXC13 JASPAR yes 61191066 2839 107558501
chr14 61188222 61188811 TCF7L2 GTRD no Colon (HCT116) 61191066 2255 108105314
chr14 61188222 61188811 TCF7L2 GTRD no Colon (HCT116) 61191066 2255 108105315
chr14 61188253 61188267 JUN JASPAR yes 61191066 2799 107558502
chr14 61188256 61188267 FOSL2 JASPAR yes 61191066 2799 107558503
chr14 61188256 61188267 JUNB JASPAR yes 61191066 2799 107558504
chr14 61188257 61188268 FOS JASPAR yes 61191066 2798 107558505
chr14 61188257 61188268 FOSL1 JASPAR yes 61191066 2798 107558506
chr14 61188257 61188268 JUND JASPAR yes 61191066 2798 107558507
chr14 61188257 61188268 NFE2 JASPAR yes 61191066 2798 107558508
chr14 61188258 61188265 JUN TRANSFAC yes 61191066 2801 107558509
chr14 61188258 61188267 JDP2 JASPAR yes 61191066 2799 107558510
chr14 61188258 61188269 FOSL2 JASPAR yes 61191066 2797 107558511
chr14 61188258 61188269 JUNB JASPAR yes 61191066 2797 107558512
chr14 61188261 61188276 ZIC3 JASPAR yes 61191066 2790 107558513
chr14 61188261 61188276 ZIC4 JASPAR yes 61191066 2790 107558514
chr14 61188262 61188276 ZIC1 JASPAR yes 61191066 2790 107558515
chr14 61188269 61188289 RREB1 JASPAR yes 61191066 2777 107558516
chr14 61188271 61188281 GCM2 JASPAR yes 61191066 2785 107558517
chr14 61188271 61188282 GCM1 JASPAR yes 61191066 2784 107558518
chr14 61188277 61188282 SP1 TRANSFAC yes 61191066 2784 107558519
chr14 61188281 61188302 ZNF263 JASPAR yes 61191066 2764 107558520
chr14 61188298 61188303 SP1 TRANSFAC yes 61191066 2763 107558521
chr14 61188307 61188521 ZNF274 GTRD no Liver (HepG2) 61191066 2545 108105316
chr14 61188307 61188521 ZNF274 GTRD no Liver (HepG2) 61191066 2545 108105317
chr14 61188309 61188619 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 61191066 2447 108105318
chr14 61188309 61188619 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 61191066 2447 108105319
chr14 61188315 61188745 CTCF UCSC Txn Factor no Conserved 61191066 2321 108105320
chr14 61188315 61188745 CTCF UCSC Txn Factor no Conserved 61191066 2321 108105321
chr14 61188323 61188333 SP1 JASPAR yes 61191066 2733 107558522
chr14 61188324 61188334 SP1 JASPAR yes 61191066 2732 107558523
chr14 61188326 61188331 SP1 TRANSFAC yes 61191066 2735 107558524
chr14 61188326 61188332 SP1 TRANSFAC yes 61191066 2734 107558525
chr14 61188327 61188347 RREB1 JASPAR yes 61191066 2719 107558526
chr14 61188331 61188336 SP1 TRANSFAC yes 61191066 2730 107558527
chr14 61188331 61188595 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 61191066 2471 108105322
chr14 61188331 61188595 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 61191066 2471 108105323
chr14 61188338 61188358 RREB1 JASPAR yes 61191066 2708 107558528
chr14 61188340 61188357 ZNF410 JASPAR yes 61191066 2709 107558529
chr14 61188342 61188352 HOXA13 JASPAR yes 61191066 2714 107558530
chr14 61188342 61188352 HOXB13 JASPAR yes 61191066 2714 107558531
chr14 61188342 61188352 HOXD13 JASPAR yes 61191066 2714 107558532
chr14 61188343 61188363 RREB1 JASPAR yes 61191066 2703 107558533
chr14 61188348 61188369 ZNF263 JASPAR yes 61191066 2697 107558534
chr14 61188351 61188356 SP1 TRANSFAC yes 61191066 2710 107558535
chr14 61188353 61188363 SP1 JASPAR yes 61191066 2703 107558536
chr14 61188353 61188374 ZNF263 JASPAR yes 61191066 2692 107558537
chr14 61188354 61188362 SP1 TRANSFAC yes 61191066 2704 107558538
chr14 61188355 61188360 SP1 TRANSFAC yes 61191066 2706 107558539
chr14 61188355 61188366 E2F4 JASPAR yes 61191066 2700 107558540
chr14 61188356 61188361 SP1 TRANSFAC yes 61191066 2705 107558541
chr14 61188356 61188362 SP1 TRANSFAC yes 61191066 2704 107558542
chr14 61188356 61188366 SP1 JASPAR yes 61191066 2700 107558543
chr14 61188357 61188367 ZNF740 JASPAR yes 61191066 2699 107558544
chr14 61188372 61188732 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 61191066 2334 108105324
chr14 61188372 61188732 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 61191066 2334 108105325
chr14 61188377 61188667 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 61191066 2399 108105326
chr14 61188377 61188667 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 61191066 2399 108105327
chr14 61188414 61188644 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 61191066 2422 108105328
chr14 61188420 61188690 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 61191066 2376 108105329
chr14 61188422 61188638 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 61191066 2428 108105330
chr14 61188427 61188617 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 61191066 2449 108105331
chr14 61188457 61188787 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 61191066 2279 108105332
chr14 61188473 61188479 NFE2 TRANSFAC yes 61191066 2587 107558545
chr14 61188490 61189766 ZBTB33 GTRD no Lung (A549) 61191066 1300 108105333
chr14 61188492 61188583 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 61191066 2483 108105334
chr14 61188500 61188506 ETS1 JASPAR yes 61191066 2560 107558546
chr14 61188501 61188590 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 61191066 2476 108105335
chr14 61188516 61188535 CTCF JASPAR yes 61191066 2531 107558547
chr14 61188519 61188538 CTCF JASPAR yes 61191066 2528 107558548
chr14 61188537 61188541 LFA1 TRANSFAC yes 61191066 2525 107558549
chr14 61188538 61188547 SNAI2 JASPAR yes 61191066 2519 107558550
chr14 61188554 61188557 MYB TRANSFAC yes 61191066 2509 107558551
chr14 61188564 61188940 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 61191066 2126 108105336
chr14 61188592 61188598 ETS1 JASPAR yes 61191066 2468 107558552
chr14 61188592 61188598 SPI1 JASPAR yes 61191066 2468 107558553
chr14 61188607 61188857 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 61191066 2209 108105337
chr14 61188609 61189313 TCF7L2 GTRD no Colon (HCT116) 61191066 1753 108105338
chr14 61188614 61188634 RREB1 JASPAR yes 61191066 2432 107558554
chr14 61188616 61188629 SCRT2 JASPAR yes 61191066 2437 107558555
chr14 61188619 61188631 IRF1 JASPAR yes 61191066 2435 107558556
chr14 61188619 61188633 IRF7 JASPAR yes 61191066 2433 107558557
chr14 61188621 61188627 TCF4 TRANSFAC yes 61191066 2439 107558558
chr14 61188629 61188644 ZBTB33 JASPAR yes 61191066 2422 107558559
chr14 61188630 61189902 ZBTB33 GTRD no Lung (A549) 61191066 1164 108105339
chr14 61188640 61189256 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 61191066 1810 108105340
chr14 61188640 61190168 ZBTB33 GTRD no Lung (A549) 61191066 898 108105341
chr14 61188645 61188665 ESR1 JASPAR yes 61191066 2401 107558560
chr14 61188645 61189364 TCF7L2 GTRD no Colon (HCT116) 61191066 1702 108105342
chr14 61188646 61188651 GATA2 JASPAR yes 61191066 2415 107558561
chr14 61188648 61188668 PPARG JASPAR yes 61191066 2398 107558562
chr14 61188650 61188665 ESR2 JASPAR yes 61191066 2401 107558563
chr14 61188651 61188655 LFA1 TRANSFAC yes 61191066 2411 107558564
chr14 61188655 61188665 SP1 JASPAR yes 61191066 2401 107558565
chr14 61188658 61189435 ZNF274 GTRD no Bone Marrow (K562) 61191066 1631 108105343
chr14 61188660 61188671 E2F6 JASPAR yes 61191066 2395 107558566
chr14 61188671 61188682 TFAP2A JASPAR yes 61191066 2384 107558567
chr14 61188671 61188682 TFAP2B JASPAR yes 61191066 2384 107558568
chr14 61188671 61188682 TFAP2C JASPAR yes 61191066 2384 107558569
chr14 61188683 61189654 ZBTB33 GTRD no Lung (A549) 61191066 1412 108105344
chr14 61188685 61189549 ZBTB33 GTRD no Lung (A549) 61191066 1517 108105345
chr14 61188706 61188721 ZIC4 JASPAR yes 61191066 2345 107558570
chr14 61188710 61188724 PLAG1 JASPAR yes 61191066 2342 107558571
chr14 61188717 61188722 SP1 TRANSFAC yes 61191066 2344 107558572
chr14 61188718 61189885 ZBTB33 GTRD no Lung (A549) 61191066 1181 108105346
chr14 61188727 61189403 ZNF274 GTRD no Liver (HepG2) 61191066 1663 108105347
chr14 61188730 61188876 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 61191066 2190 108105348
chr14 61188733 61189565 TCF7L2 GTRD no Colon (HCT116) 61191066 1501 108105349
chr14 61188733 61189907 ZBTB33 GTRD no Lung (A549) 61191066 1159 108105350
chr14 61188734 61188740 SP1 TRANSFAC yes 61191066 2326 107558573
chr14 61188735 61188740 SP1 TRANSFAC yes 61191066 2326 107558574
chr14 61188736 61188741 SP1 TRANSFAC yes 61191066 2325 107558575
chr14 61188737 61189626 ZNF274 GTRD no Blood (GM12878) 61191066 1440 108105351
chr14 61188751 61189530 ZBTB33 GTRD no Lung (A549) 61191066 1536 108105352
chr14 61188751 61189594 ZBTB33 GTRD no Lung (A549) 61191066 1472 108105353
chr14 61188760 61189503 ZNF274 GTRD no Liver (HepG2) 61191066 1563 108105354
SNPs associated with SIX4[ENSG00000100625.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr14 62024865 rs10133831 A G 833799 Esophagus 0.050707 3591817
chr14 62006054 rs117498462 A G 814988 Esophagus 0.232362 3591639
chr14 61560102 rs141173317 T G 369036 Heart 0.0260584 3586637
chr14 61976037 rs17098617 A C 784971 Heart 0.139185 3591245
chr14 62040734 rs17098872 C T 849668 Breast 0.414531 3592008
chr14 62061834 rs77514219 G A 870768 Uterus 0.445558 3592262
chr14 61591846 rs764262544 CT C 400780 Lung 0.320702 3587089
chr14 61636476 rs151081436 A G 445410 Stomach 0.133351 3587570
chr14 61428566 rs4151402 G A 237500 Adrenal 0.148756 3586144
Details of SIX4[ENSG00000100625.8]
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Genomic Location chr14:61176246-61191066[-]
TSS 61191066
Gene Name SIX4
Ensembl ID ENSG00000100625.8
ENTREZID 51804
Uniprot
Q9UIU6
Protein Name
Homeobox protein SIX4
Expression levels of SIX4[ENSG00000100625.8]
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