EnhancerDB
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Enhancers that regulate RBFA[ENSG00000101546.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr18 77697180 77701418 enh44615 77794358 92940
Thyroid Muscle (Myotube)
chr18 77703965 77708115 enh4945 77794358 86243
Blood (Karpas-422)
chr18 77713083 77713430 vista28068 77794358 80928
VISTA
chr18 77715299 77715635 vista28069 77794358 78723
VISTA
chr18 77721815 77722347 vista28070 77794358 72011
VISTA
chr18 77723013 77723575 vista28071 77794358 70783
VISTA
chr18 77740825 77745515 enh88363 77794358 48843
Pancreas Liver (HepG2)
chr18 77763025 77767175 enh4946 77794358 27183
Blood (Karpas-422)
chr18 77768289 77772515 enh32868 77794358 21843
Esophagus Astrocyte Prostate (PC-3) Cervix (HeLa-S3)
chr18 77784485 77790015 enh81483 77794358 4343
Prostate (PC-3)
chr18 77868545 77873695 enh76091 77794358 74187
Muscle (A673) Colon (HCT116) Liver (HepG2)
chr18 77879983 77885325 enh58840 77794358 85625
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Lung (PC-9) Epithelial (MCF-7)
Transcript facotrs that regulate RBFA[ENSG00000101546.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr18 77789353 77789364 RUNX1 JASPAR yes 77794358 4994 111843444
chr18 77789387 77789391 NFE TRANSFAC yes 77794358 4967 111843445
chr18 77789429 77789440 FOXC1 JASPAR yes 77794358 4918 111843446
chr18 77789430 77789441 FOXA1 JASPAR yes 77794358 4917 111843447
chr18 77789452 77789463 STAT3 JASPAR yes 77794358 4895 111843448
chr18 77789453 77789468 TFAP2C JASPAR yes 77794358 4890 111843449
chr18 77789454 77789466 TFAP2A JASPAR yes 77794358 4892 111843450
chr18 77789454 77789466 TFAP2B JASPAR yes 77794358 4892 111843451
chr18 77789454 77789466 TFAP2C JASPAR yes 77794358 4892 111843452
chr18 77789464 77789479 RUNX2 JASPAR yes 77794358 4879 111843453
chr18 77789480 77789485 MYC TRANSFAC yes 77794358 4873 111843454
chr18 77789482 77789492 NFATC3 JASPAR yes 77794358 4866 111843455
chr18 77789484 77789491 NFATC2 JASPAR yes 77794358 4867 111843456
chr18 77789508 77789513 GATA2 JASPAR yes 77794358 4845 111843457
chr18 77789525 77789536 EBF1 JASPAR yes 77794358 4822 111843458
chr18 77789528 77789537 ZEB1 JASPAR yes 77794358 4821 111843459
chr18 77789535 77789540 ATF1 TRANSFAC yes 77794358 4818 111843460
chr18 77789536 77789551 RFX5 JASPAR yes 77794358 4807 111843461
chr18 77789548 77789561 NFKB1 JASPAR yes 77794358 4797 111843462
chr18 77789550 77789560 RELA JASPAR yes 77794358 4798 111843463
chr18 77789573 77789585 POU3F1 JASPAR yes 77794358 4773 111843464
chr18 77789573 77789585 POU3F2 JASPAR yes 77794358 4773 111843465
chr18 77789583 77789587 YY1 TRANSFAC yes 77794358 4771 111843466
chr18 77789600 77789621 IRF1 JASPAR yes 77794358 4737 111843467
chr18 77789602 77789613 FOXB1 JASPAR yes 77794358 4745 111843468
chr18 77789602 77789613 FOXC1 JASPAR yes 77794358 4745 111843469
chr18 77789603 77789607 YY1 TRANSFAC yes 77794358 4751 111843470
chr18 77789608 77789624 SOX4 JASPAR yes 77794358 4734 111843471
chr18 77789609 77789624 SOX21 JASPAR yes 77794358 4734 111843472
chr18 77789611 77789615 YY1 TRANSFAC yes 77794358 4743 111843473
chr18 77789616 77789625 SOX9 JASPAR yes 77794358 4733 111843474
chr18 77789631 77789637 MZF1 JASPAR yes 77794358 4721 111843475
chr18 77789634 77789638 H1TF2 TRANSFAC yes 77794358 4720 111843476
chr18 77789634 77789638 NFE TRANSFAC yes 77794358 4720 111843477
chr18 77789634 77789638 SRF TRANSFAC yes 77794358 4720 111843478
chr18 77789634 77789649 TFAP2C JASPAR yes 77794358 4709 111843479
chr18 77789658 77789671 ZBTB18 JASPAR yes 77794358 4687 111843480
chr18 77789673 77789688 TFAP2C JASPAR yes 77794358 4670 111843481
chr18 77789675 77789687 TFAP2A JASPAR yes 77794358 4671 111843482
chr18 77789675 77789687 TFAP2B JASPAR yes 77794358 4671 111843483
chr18 77789685 77789689 YY1 TRANSFAC yes 77794358 4669 111843484
chr18 77789707 77789728 REST JASPAR yes 77794358 4630 111843485
chr18 77789708 77789727 REST JASPAR yes 77794358 4631 111843486
chr18 77789711 77789721 MZF1 JASPAR yes 77794358 4637 111843487
chr18 77789734 77789738 H1TF2 TRANSFAC yes 77794358 4620 111843488
chr18 77789734 77789738 NFE TRANSFAC yes 77794358 4620 111843489
chr18 77789734 77789738 SRF TRANSFAC yes 77794358 4620 111843490
chr18 77789737 77789743 ZNF354C JASPAR yes 77794358 4615 111843491
chr18 77789749 77789756 NFATC2 JASPAR yes 77794358 4602 111843492
chr18 77789750 77789758 FOXO3 JASPAR yes 77794358 4600 111843493
chr18 77789754 77789764 MYF6 JASPAR yes 77794358 4594 111843494
chr18 77789778 77789781 MYB TRANSFAC yes 77794358 4577 111843495
chr18 77789788 77789798 MAX JASPAR yes 77794358 4560 111843496
chr18 77789800 77789812 FOXI1 JASPAR yes 77794358 4546 111843497
chr18 77789823 77789837 EBF1 JASPAR yes 77794358 4521 111843498
chr18 77789824 77789835 EBF1 JASPAR yes 77794358 4523 111843499
chr18 77789839 77789850 CEBPB JASPAR yes 77794358 4508 111843500
chr18 77789839 77789852 ATF4 JASPAR yes 77794358 4506 111843501
chr18 77789840 77789851 CEBPA JASPAR yes 77794358 4507 111843502
chr18 77789869 77789875 TBP TRANSFAC yes 77794358 4483 111843503
chr18 77789897 77789902 ETS2 TRANSFAC yes 77794358 4456 111843504
chr18 77789901 77789916 AR JASPAR yes 77794358 4442 111843505
chr18 77789919 77789933 GATA2 JASPAR yes 77794358 4425 111843506
chr18 77789921 77789929 GATA3 JASPAR yes 77794358 4429 111843507
chr18 77789921 77789929 GATA5 JASPAR yes 77794358 4429 111843508
chr18 77789929 77789940 NFE2L2 JASPAR yes 77794358 4418 111843509
chr18 77789934 77789938 ESR1 TRANSFAC yes 77794358 4420 111843510
chr18 77789967 77789974 NFATC2 JASPAR yes 77794358 4384 111843511
chr18 77789979 77789989 HOXA13 JASPAR yes 77794358 4369 111843512
chr18 77789979 77789989 HOXD13 JASPAR yes 77794358 4369 111843513
chr18 77790002 77790006 H1TF2 TRANSFAC yes 77794358 4352 111843514
chr18 77790002 77790006 NFE TRANSFAC yes 77794358 4352 111843515
chr18 77790002 77790006 SRF TRANSFAC yes 77794358 4352 111843516
SNPs associated with RBFA[ENSG00000101546.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr18 77800697 rs78232723 T A 0 Esophagus 0.000337754 5361844
chr18 77936214 rs11660391 G A 129817 Spleen 0.35115 5362117
chr18 77212281 rs55879720 G A,T 582077 Ovary 0.31081 5357821
chr18 77794026 rs55725183 C T 332 Thyroid 0.000152199 5361819
Details of RBFA[ENSG00000101546.8]
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Genomic Location chr18:77794358-77806397[+]
TSS 77794358
Gene Name RBFA
Ensembl ID ENSG00000101546.8
ENTREZID 79863
Uniprot
Q8N0V3
Protein Name
Expression levels of RBFA[ENSG00000101546.8]
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