EnhancerDB
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Enhancers that regulate CLC[ENSG00000105205.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 40126065 40138715 enh18068 40228668 89953
Placenta
chr19 40159762 40189355 enh5134 40228668 39313
Liver (HepG2) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
chr19 40166744 40166863 vista29369 40228668 61805
VISTA
chr19 40214545 40221735 enh18069 40228668 6933
Placenta Peripheral Blood (MM.1S)
chr19 40229628 40229757 vista29370 40228668 960
VISTA
chr19 40235565 40240035 enh18070 40228668 6897
Pancreas Placenta Epithelial (MCF-7)
chr19 40248245 40252735 enh5135 40228668 19577
Peripheral Blood (MM.1S) Blood (Karpas-422)
chr19 40254203 40261215 enh69558 40228668 25535
Thyroid Neural Stem Cells (H9)
chr19 40283749 40284047 vista29371 40228668 55081
VISTA
chr19 40284853 40289003 enh69559 40228668 56185
Neural Stem Cells (H9)
chr19 40305385 40309535 enh65189 40228668 76717
Heart
chr19 40311202 40315355 enh5136 40228668 82534
Bone (Osteoblast) Blood (Karpas-422)
chr19 40315090 40315548 vista29372 40228668 86422
VISTA
Transcript facotrs that regulate CLC[ENSG00000105205.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 40225201 40232929 ZBTB33 GTRD no Lung (A549) 40228668 3467 108408471
chr19 40227163 40230983 ZNF274 GTRD no Blood (GM12878) 40228668 1505 108408472
chr19 40227336 40230753 ZNF274 GTRD no Blood (GM12878) 40228668 1332 108408473
chr19 40227344 40233004 ZBTB33 GTRD no Lung (A549) 40228668 1324 108408474
chr19 40228754 40230579 ZBTB33 GTRD no Lung (A549) 40228668 86 108408475
chr19 40228834 40232897 ZNF274 GTRD no Liver (HepG2) 40228668 166 108408476
chr19 40228847 40230726 ZNF274 GTRD no Blood (GM12878) 40228668 179 108408477
chr19 40228858 40230481 ZBTB33 GTRD no Brain (SK-N-SH) 40228668 190 108408478
chr19 40228902 40230815 ZBTB33 GTRD no Lung (A549) 40228668 234 108408479
chr19 40228921 40231316 ZBTB33 GTRD no Lung (A549) 40228668 253 108408480
chr19 40228949 40230227 ZNF274 GTRD no Blood (GM12878) 40228668 281 108408481
chr19 40229028 40230464 ZBTB33 GTRD no Lung (A549) 40228668 360 108408482
chr19 40229038 40230057 ZNF274 GTRD no Bone Marrow (K562) 40228668 370 108408483
chr19 40229201 40229925 ZBTB33 GTRD no Brain (SK-N-SH) 40228668 533 108408484
chr19 40229202 40230203 ZNF274 GTRD no Bone Marrow (K562) 40228668 534 108408485
chr19 40229242 40229954 ZNF274 GTRD no Bone Marrow (K562) 40228668 574 108408486
chr19 40229246 40230033 ZNF274 GTRD no Bone Marrow (K562) 40228668 578 108408487
chr19 40229273 40230055 ZBTB33 GTRD no Brain (SK-N-SH) 40228668 605 108408488
chr19 40229288 40229995 ZBTB33 GTRD no Brain (SK-N-SH) 40228668 620 108408489
chr19 40229318 40229894 ZBTB33 GTRD no Brain (SK-N-SH) 40228668 650 108408490
chr19 40229340 40230179 ZBTB33 GTRD no Lung (A549) 40228668 672 108408491
chr19 40229341 40229908 ZBTB33 GTRD no Brain (SK-N-SH) 40228668 673 108408492
chr19 40229344 40229985 ZNF274 GTRD no Bone Marrow (K562) 40228668 676 108408493
chr19 40229413 40229965 ZNF274 GTRD no Blood (GM12878) 40228668 745 108408494
chr19 40229414 40229933 TCF7L2 GTRD no Colon (HCT116) 40228668 746 108408495
chr19 40229423 40229790 ZNF274 GTRD no Bone Marrow (K562) 40228668 755 108408496
chr19 40229445 40229981 ZNF274 GTRD no Bone Marrow (K562) 40228668 777 108408497
chr19 40229446 40230363 ZNF274 GTRD no Blood (GM12878) 40228668 778 108408498
chr19 40229458 40229900 ZNF274 GTRD no Liver (HepG2) 40228668 790 108408499
chr19 40229518 40229822 ZNF274 GTRD no Bone Marrow (K562) 40228668 850 108408500
chr19 40229528 40229875 TCF7L2 GTRD no Colon (HCT116) 40228668 860 108408501
chr19 40229560 40229764 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 40228668 892 108408502
chr19 40229560 40229774 SPI1 UCSC Txn Factor no Conserved 40228668 892 108408503
chr19 40229565 40229774 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 40228668 897 108408504
chr19 40229654 40229665 RUNX1 JASPAR yes 40228668 986 70845720
chr19 40229660 40229674 STAT1 JASPAR yes 40228668 992 70845721
chr19 40229660 40229675 PRDM1 JASPAR yes 40228668 992 70845722
chr19 40229662 40229683 IRF1 JASPAR yes 40228668 994 70845723
chr19 40229666 40229680 SPI1 JASPAR yes 40228668 998 70845724
chr19 40229666 40229680 STAT1 JASPAR yes 40228668 998 70845725
chr19 40229666 40229681 STAT2 JASPAR yes 40228668 998 70845726
chr19 40229670 40229677 SPIB JASPAR yes 40228668 1002 70845727
chr19 40229683 40229688 ETS2 TRANSFAC yes 40228668 1015 70845728
chr19 40229712 40229718 JUN TRANSFAC yes 40228668 1044 70845729
chr19 40229712 40229723 BATF JASPAR yes 40228668 1044 70845730
chr19 40229719 40229724 GATA2 JASPAR yes 40228668 1051 70845731
chr19 40229737 40229751 SPIC JASPAR yes 40228668 1069 70845732
chr19 40229741 40229746 TFAP2A TRANSFAC yes 40228668 1073 70845733
chr19 40229741 40229747 MZF1 JASPAR yes 40228668 1073 70845734
chr19 40229743 40229748 ETS2 TRANSFAC yes 40228668 1075 70845735
SNPs associated with CLC[ENSG00000105205.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of CLC[ENSG00000105205.6]
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Genomic Location chr19:40221890-40228668[-]
TSS 40228668
Gene Name CLC
Ensembl ID ENSG00000105205.6
ENTREZID 1178
Uniprot
Q05315
Protein Name
Cardiotrophin-like cytokine factor 1
Galectin-10
Expression levels of CLC[ENSG00000105205.6]
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