EnhancerDB
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Enhancers that regulate CNFN[ENSG00000105427.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 42815445 42820555 enh5157 42894439 73884
Blood (Karpas-422)
chr19 42841585 42845735 enh5158 42894439 48704
Blood (Karpas-422)
chr19 42867425 42871595 enh5159 42894439 22844
Spleen Blood (Karpas-422)
chr19 42884347 42888497 enh69562 42894439 5942
Neural Stem Cells (H9)
chr19 42898545 42904055 enh5160 42894439 4106
Cervix (HeLa-S3) Uterus Blood (Karpas-422)
chr19 42902919 42903213 vista29486 42894439 8480
VISTA
chr19 42913594 42913985 vista29487 42894439 19155
VISTA
chr19 42921890 42926825 enh5161 42894439 27451
Cervix (HeLa-S3) Prostate (RWPE1) Blood (OCI-LY7) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Thymus
chr19 42924318 42924497 vista29488 42894439 29879
VISTA
chr19 42925830 42926271 vista29489 42894439 31391
VISTA
chr19 42935825 42945975 enh62730 42894439 41386
Liver (HepG2) Brain (SK-N-MC) Esophagus Lung (PC-9) Blood (T-cell) Epithelial (MCF-7)
chr19 42948068 42948265 vista29490 42894439 53629
VISTA
chr19 42951985 42962292 enh48196 42894439 57546
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Stomach Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr19 42954515 42954747 vista29491 42894439 60076
VISTA
chr19 42963925 42987915 enh5162 42894439 69486
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Blood (OCI-LY7) Lung (A549) Stomach Placenta Colon (HCT116) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Embryonic Stem Cell Line (H1-hESC) Blood (T-cell) Epithelial (MCF-7)
chr19 42964614 42965000 vista29492 42894439 70175
VISTA
chr19 42990965 42995675 enh81520 42894439 96526
Prostate (PC-3) Liver (HepG2) Stomach
Transcript facotrs that regulate CNFN[ENSG00000105427.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 42898560 42899193 ZNF274 GTRD no Cervix (HeLa-S3) 42894439 4121 21866725
chr19 42899167 42899170 MYB TRANSFAC yes 42894439 4728 113417646
chr19 42899187 42899200 POU2F2 JASPAR yes 42894439 4748 113417647
chr19 42899206 42899211 GATA2 JASPAR yes 42894439 4767 113417648
chr19 42899209 42899213 YY1 TRANSFAC yes 42894439 4770 113417649
chr19 42899235 42899250 RUNX2 JASPAR yes 42894439 4796 113417650
chr19 42899238 42899249 RUNX1 JASPAR yes 42894439 4799 113417651
chr19 42899238 42899250 ZBTB7C JASPAR yes 42894439 4799 113417652
chr19 42899239 42899249 RUNX3 JASPAR yes 42894439 4800 113417653
chr19 42899239 42899251 ZBTB7A JASPAR yes 42894439 4800 113417654
chr19 42899257 42899261 YY1 TRANSFAC yes 42894439 4818 113417655
chr19 42899261 42899276 TP53 JASPAR yes 42894439 4822 113417656
chr19 42899299 42899319 RREB1 JASPAR yes 42894439 4860 113417657
chr19 42899306 42899312 SOX10 JASPAR yes 42894439 4867 113417658
chr19 42899337 42899340 MYB TRANSFAC yes 42894439 4898 113417659
chr19 42899340 42899348 HOXA5 JASPAR yes 42894439 4901 113417660
chr19 42899350 42899356 YY1 JASPAR yes 42894439 4911 113417661
chr19 42899352 42899364 HES5 JASPAR yes 42894439 4913 113417662
chr19 42899352 42899364 HES7 JASPAR yes 42894439 4913 113417663
chr19 42899353 42899363 BHLHE40 JASPAR yes 42894439 4914 113417664
chr19 42899353 42899363 BHLHE41 JASPAR yes 42894439 4914 113417665
chr19 42899353 42899363 CLOCK JASPAR yes 42894439 4914 113417666
chr19 42899353 42899363 HEY1 JASPAR yes 42894439 4914 113417667
chr19 42899353 42899363 HEY2 JASPAR yes 42894439 4914 113417668
chr19 42899353 42899363 MAX JASPAR yes 42894439 4914 113417669
chr19 42899353 42899363 MLXIPL JASPAR yes 42894439 4914 113417670
chr19 42899353 42899363 MLX JASPAR yes 42894439 4914 113417671
chr19 42899353 42899363 MNT JASPAR yes 42894439 4914 113417672
chr19 42899353 42899363 TFE3 JASPAR yes 42894439 4914 113417673
chr19 42899353 42899363 TFEB JASPAR yes 42894439 4914 113417674
chr19 42899353 42899363 TFEC JASPAR yes 42894439 4914 113417675
chr19 42899354 42899364 MAX JASPAR yes 42894439 4915 113417676
chr19 42899355 42899360 MYC TRANSFAC yes 42894439 4916 113417677
chr19 42899355 42899360 USF1 TRANSFAC yes 42894439 4916 113417678
chr19 42899355 42899360 USF2 TRANSFAC yes 42894439 4916 113417679
chr19 42899363 42899371 MGA JASPAR yes 42894439 4924 113417680
chr19 42899367 42899375 NR4A2 JASPAR yes 42894439 4928 113417681
chr19 42899376 42899380 YY1 TRANSFAC yes 42894439 4937 113417682
chr19 42899402 42899420 SRF JASPAR yes 42894439 4963 113417683
chr19 42899404 42899419 MEF2A JASPAR yes 42894439 4965 113417684
chr19 42899406 42899418 MEF2B JASPAR yes 42894439 4967 113417685
chr19 42899406 42899418 MEF2D JASPAR yes 42894439 4967 113417686
chr19 42899408 42899412 TEAD2 TRANSFAC yes 42894439 4969 113417687
chr19 42899408 42899418 ALX3 JASPAR yes 42894439 4969 113417688
chr19 42899409 42899417 DLX6 JASPAR yes 42894439 4970 113417689
chr19 42899409 42899417 MSX2 JASPAR yes 42894439 4970 113417690
chr19 42899434 42899446 NHLH1 JASPAR yes 42894439 4995 113417691
chr19 42899435 42899445 NHLH1 JASPAR yes 42894439 4996 113417692
chr19 42899435 42899445 TFAP4 JASPAR yes 42894439 4996 113417693
SNPs associated with CNFN[ENSG00000105427.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of CNFN[ENSG00000105427.5]
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Genomic Location chr19:42891171-42894439[-]
TSS 42894439
Gene Name CNFN
Ensembl ID ENSG00000105427.5
ENTREZID 84518
Uniprot
Q9BYD5
Protein Name
Cornifelin
Expression levels of CNFN[ENSG00000105427.5]
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