EnhancerDB
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Enhancers that regulate RBM28[ENSG00000106344.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr7 127885182 127890635 enh24491 127983962 93327
Muscle (Myotube) Placenta
chr7 127897249 127909455 enh24492 127983962 74507
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Stomach Placenta Colon (HCT116) Lung (PC-9) Pancreas Uterus Epithelial (MCF-7)
chr7 127911154 127917535 enh73016 127983962 66427
Liver (HepG2) Neural Stem Cells (H9)
chr7 127956845 127960995 enh94703 127983962 22967
Spleen
chr7 127992889 127998055 enh109140 127983962 8927
Brain (SK-N-SH) Lung (PC-9)
chr7 128018889 128032105 enh10021 127983962 34927
Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Muscle (A673) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
chr7 128043645 128048575 enh24493 127983962 59683
Placenta Uterus Thymus
chr7 128047079 128047125 vista57231 127983962 63117
VISTA
chr7 128057925 128077796 enh24494 127983962 73963
Esophagus Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Blood (T-cell) Epithelial (MCF-7)
chr7 128080485 128088606 enh24495 127983962 96523
Large Intestine Esophagus Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript facotrs that regulate RBM28[ENSG00000106344.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with RBM28[ENSG00000106344.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr7 127887068 rs12706831 T G 50670 Esophagus 0.0556405 10078795
chr7 127854191 rs112425372 G A 83547 Breast 0.162549 10078589
chr7 128730026 rs398048121 CT C 746064 Ovary 0.410537 10081901
chr7 127950725 rs12850 G A 0 Lung 0.0163434 10079114
chr7 128473769 rs111893767 C A,T 489807 Stomach 0.297164 10080982
chr7 128501276 rs117569386 C T 517314 Adrenal 0.305686 10081065
Details of RBM28[ENSG00000106344.4]
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Genomic Location chr7:127937738-127983962[-]
TSS 127983962
Gene Name RBM28
Ensembl ID ENSG00000106344.4
ENTREZID 55131
Uniprot
A0A024R753
Q9NW13
Protein Name
Alternative protein RBM28
RNA binding motif protein 28 isoform 1
RNA binding motif protein 28 isoform 2
RNA-binding protein 28
Expression levels of RBM28[ENSG00000106344.4]
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