EnhancerDB
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Enhancers that regulate PFN1[ENSG00000108518.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 4739171 4760073 enh16944 4852356 92283
Bone Marrow (K562) Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 4752478 4752731 vista23807 4852356 99625
VISTA
chr17 4753672 4753828 vista23808 4852356 98528
VISTA
chr17 4756821 4757222 vista23809 4852356 95134
VISTA
chr17 4763425 4767575 enh92705 4852356 84781
Liver (HepG2)
chr17 4774185 4778335 enh94295 4852356 74021
Spleen
chr17 4810885 4816835 enh16945 4852356 35521
Placenta
chr17 4811647 4812042 vista23810 4852356 40314
VISTA
chr17 4812526 4812616 vista23811 4852356 39740
VISTA
chr17 4821025 4826315 enh16946 4852356 26041
Placenta Neural Stem Cells (H9)
chr17 4839784 4839936 vista23812 4852356 12420
VISTA
chr17 4840585 4847535 enh4224 4852356 4821
Blood (Karpas-422)
chr17 4915328 4915680 vista23813 4852356 62972
VISTA
chr17 4918265 4922415 enh4225 4852356 65909
Spleen Blood (Karpas-422)
chr17 4934963 4935218 vista23814 4852356 82607
VISTA
chr17 4943525 4953191 enh16947 4852356 91169
Bone Marrow (K562) Large Intestine Blood (T-cell) Blood (OCI-LY7) Placenta Lung (PC-9) Thymus Stomach
chr17 4950916 4951277 vista23815 4852356 98560
VISTA
Transcript facotrs that regulate PFN1[ENSG00000108518.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 4847350 4847365 FOXP1 JASPAR yes 4852356 4991 52863120
chr17 4847350 4847365 MEF2C JASPAR yes 4852356 4991 52863121
chr17 4847351 4847362 FOXP2 JASPAR yes 4852356 4994 52863122
chr17 4847355 4847368 POU2F2 JASPAR yes 4852356 4988 52863123
chr17 4847358 4847371 POU2F2 JASPAR yes 4852356 4985 52863124
chr17 4847375 4847396 ZNF263 JASPAR yes 4852356 4960 52863125
chr17 4847416 4847433 ZNF410 JASPAR yes 4852356 4923 52863126
chr17 4847426 4847435 SRY JASPAR yes 4852356 4921 52863127
chr17 4847428 4847437 SOX9 JASPAR yes 4852356 4919 52863128
chr17 4847439 4847444 GATA2 JASPAR yes 4852356 4912 52863129
chr17 4847446 4847452 TCF4 TRANSFAC yes 4852356 4904 52863130
chr17 4847450 4847462 SRF JASPAR yes 4852356 4894 52863131
chr17 4847469 4847490 ZNF263 JASPAR yes 4852356 4866 52863132
chr17 4847475 4847496 ZNF263 JASPAR yes 4852356 4860 52863133
chr17 4847476 4847490 SPIC JASPAR yes 4852356 4866 52863134
chr17 4847482 4847494 TEAD1 JASPAR yes 4852356 4862 52863135
chr17 4847483 4847489 PEA3 TRANSFAC yes 4852356 4867 52863136
chr17 4847490 4847495 TFAP2A TRANSFAC yes 4852356 4861 52863137
chr17 4847490 4847496 MZF1 JASPAR yes 4852356 4860 52863138
chr17 4847510 4847515 ETS2 TRANSFAC yes 4852356 4841 52863139
chr17 4847514 4847528 IRF8 JASPAR yes 4852356 4828 52863140
chr17 4847517 4847527 TFCP2 JASPAR yes 4852356 4829 52863141
SNPs associated with PFN1[ENSG00000108518.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 4553297 rs75902298 G A 295650 Esophagus 0.36455 4714812
chr17 4407712 rs9896111 A G 441235 Heart 0.298842 4713294
chr17 4972269 rs77744318 A C 119913 Breast 0.436231 4717642
chr17 4847452 rs1567238 C T 1495 Adrenal 0.22472 4716901
Details of PFN1[ENSG00000108518.7]
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Genomic Location chr17:4848947-4852356[-]
TSS 4852356
Gene Name PFN1
Ensembl ID ENSG00000108518.7
ENTREZID 5216
Uniprot
P07737
Protein Name
Profilin
Profilin-1
Expression levels of PFN1[ENSG00000108518.7]
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