EnhancerDB
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Enhancers that regulate APOA4[ENSG00000110244.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr11 116594454 116605675 enh43623 116694022 88347
Bone Marrow (K562) Muscle (Myotube) Bone (Osteoblast) Large Intestine
chr11 116610965 116615755 enh29177 116694022 78267
Astrocyte Spleen
chr11 116676945 116687185 enh14302 116694022 6837
Liver (HepG2) Prostate (RWPE1) Large Intestine Liver Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Pancreas Epithelial (MCF-7)
chr11 116679644 116679851 vista11671 116694022 14171
VISTA
chr11 116697562 116697929 vista11672 116694022 3540
VISTA
chr11 116719892 116728215 enh29178 116694022 25870
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Uterus Thymus Heart
chr11 116722234 116722744 vista11673 116694022 28212
VISTA
chr11 116723326 116723638 vista11674 116694022 29304
VISTA
chr11 116741935 116742274 vista11675 116694022 47913
VISTA
chr11 116748665 116752815 enh74924 116694022 54643
Muscle (A673) Ovary
chr11 116754805 116763155 enh47525 116694022 60783
Prostate (PC-3) Liver (HepG2) Blood (T-cell) Pancreas Uterus Thymus Stomach
chr11 116770013 116774197 enh43624 116694022 75991
Muscle (Myotube)
chr11 116778105 116793715 enh60327 116694022 84083
Prostate (PC-3) Brain (SK-N-MC) Esophagus Blood (OCI-LY7) Muscle (A673) Lung (PC-9) Breast
chr11 116790672 116791048 vista11676 116694022 96650
VISTA
Transcript facotrs that regulate APOA4[ENSG00000110244.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr11 116697357 116697973 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3335 108000007
chr11 116697400 116697944 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3378 108000008
chr11 116697429 116697706 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3407 108000009
chr11 116697449 116697765 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3427 108000010
chr11 116697459 116697839 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3437 108000011
chr11 116697522 116697882 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3500 108000012
chr11 116697529 116697753 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3507 108000013
chr11 116697529 116697919 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3507 108000014
chr11 116697531 116698095 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3509 108000015
chr11 116697537 116697813 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3515 108000016
chr11 116697557 116697897 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3535 108000017
chr11 116697560 116697960 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3538 108000018
chr11 116697573 116697869 HNF4A UCSC Txn Factor no Conserved 116694022 3551 108000019
chr11 116697580 116697804 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3558 108000020
chr11 116697581 116697851 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3559 108000021
chr11 116697585 116697829 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3563 108000022
chr11 116697585 116697985 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3563 108000023
chr11 116697591 116697834 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3569 108000024
chr11 116697593 116697607 GATA2 JASPAR yes 116694022 3571 114135755
chr11 116697593 116697929 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3571 108000025
chr11 116697597 116697605 GATA3 JASPAR yes 116694022 3575 114135756
chr11 116697597 116697605 GATA5 JASPAR yes 116694022 3575 114135757
chr11 116697603 116697863 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3581 108000026
chr11 116697605 116697618 SCRT2 JASPAR yes 116694022 3583 114135758
chr11 116697605 116697620 SCRT1 JASPAR yes 116694022 3583 114135759
chr11 116697606 116697942 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3584 108000027
chr11 116697618 116697633 HNF1A JASPAR yes 116694022 3596 114135760
chr11 116697619 116697632 HNF1B JASPAR yes 116694022 3597 114135761
chr11 116697622 116697634 PBX1 JASPAR yes 116694022 3600 114135762
chr11 116697623 116697873 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3601 108000028
chr11 116697625 116697630 NFY TRANSFAC yes 116694022 3603 114135763
chr11 116697626 116697641 JUND JASPAR yes 116694022 3604 114135764
chr11 116697627 116697640 JUN JASPAR yes 116694022 3605 114135765
chr11 116697628 116697641 ATF4 JASPAR yes 116694022 3606 114135766
chr11 116697637 116697858 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3615 108000029
chr11 116697646 116697664 MAFF JASPAR yes 116694022 3624 114135767
chr11 116697647 116697662 MAFK JASPAR yes 116694022 3625 114135768
chr11 116697647 116698037 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3625 108000030
chr11 116697654 116697934 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3632 108000031
chr11 116697656 116697660 YY1 TRANSFAC yes 116694022 3634 114135769
chr11 116697665 116697684 CTCF JASPAR yes 116694022 3643 114135770
chr11 116697671 116697677 SP1 TRANSFAC yes 116694022 3649 114135771
chr11 116697671 116697779 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3649 108000032
chr11 116697675 116697991 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3653 108000033
chr11 116697679 116698049 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3657 108000034
chr11 116697681 116697800 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3659 108000035
chr11 116697681 116697881 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3659 108000036
chr11 116697682 116697692 RUNX3 JASPAR yes 116694022 3660 114135772
chr11 116697692 116697700 RHOXF1 JASPAR yes 116694022 3670 114135773
chr11 116697705 116697981 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 116694022 3683 108000037
chr11 116697706 116697710 ESR1 TRANSFAC yes 116694022 3684 114135774
chr11 116697708 116697723 HNF4G JASPAR yes 116694022 3686 114135775
chr11 116697709 116697723 NR2F1 JASPAR yes 116694022 3687 114135776
chr11 116697709 116697723 RXRB JASPAR yes 116694022 3687 114135777
chr11 116697709 116697723 RXRG JASPAR yes 116694022 3687 114135778
chr11 116697709 116697724 HNF4A JASPAR yes 116694022 3687 114135779
chr11 116697714 116697727 NR2F1 JASPAR yes 116694022 3692 114135780
chr11 116697715 116697730 NR2C2 JASPAR yes 116694022 3693 114135781
chr11 116697718 116697722 ESR1 TRANSFAC yes 116694022 3696 114135782
chr11 116697753 116697768 AR JASPAR yes 116694022 3731 114135783
chr11 116697758 116697778 ESR1 JASPAR yes 116694022 3736 114135784
chr11 116697761 116697779 ESR2 JASPAR yes 116694022 3739 114135785
chr11 116697762 116697779 ESR1 JASPAR yes 116694022 3740 114135786
chr11 116697762 116697780 RARA JASPAR yes 116694022 3740 114135787
chr11 116697763 116697778 ESR2 JASPAR yes 116694022 3741 114135788
chr11 116697763 116697783 ESR1 JASPAR yes 116694022 3741 114135789
chr11 116697764 116697768 ESR1 TRANSFAC yes 116694022 3742 114135790
chr11 116697772 116697784 HES5 JASPAR yes 116694022 3750 114135791
chr11 116697773 116697784 USF2 JASPAR yes 116694022 3751 114135792
chr11 116697774 116697784 MAX JASPAR yes 116694022 3752 114135793
chr11 116697798 116697803 SP1 TRANSFAC yes 116694022 3776 114135794
chr11 116697798 116697809 NFKB1 JASPAR yes 116694022 3776 114135795
chr11 116697801 116697811 SP1 JASPAR yes 116694022 3779 114135796
chr11 116697804 116697812 SP1 TRANSFAC yes 116694022 3782 114135797
chr11 116697806 116697815 TFAP2A JASPAR yes 116694022 3784 114135798
chr11 116697811 116697815 LFA1 TRANSFAC yes 116694022 3789 114135799
chr11 116697814 116698020 ZNF274 GTRD no Blood (GM12878) 116694022 3792 108000038
chr11 116697830 116697849 RFX2 JASPAR yes 116694022 3808 114135800
chr11 116697836 116697855 CTCF JASPAR yes 116694022 3814 114135801
chr11 116697843 116697854 E2F6 JASPAR yes 116694022 3821 114135802
chr11 116697867 116697873 PEA3 TRANSFAC yes 116694022 3845 114135803
chr11 116697871 116697882 ELK4 JASPAR yes 116694022 3849 114135804
chr11 116697871 116697882 FLI1 JASPAR yes 116694022 3849 114135805
chr11 116697871 116697884 ELF3 JASPAR yes 116694022 3849 114135806
chr11 116697872 116697882 ELK1 JASPAR yes 116694022 3850 114135807
chr11 116697872 116697882 ELK3 JASPAR yes 116694022 3850 114135808
chr11 116697872 116697882 ERF JASPAR yes 116694022 3850 114135809
chr11 116697872 116697882 ERG JASPAR yes 116694022 3850 114135810
chr11 116697872 116697882 ETS1 JASPAR yes 116694022 3850 114135811
chr11 116697872 116697882 ETV1 JASPAR yes 116694022 3850 114135812
chr11 116697872 116697882 ETV3 JASPAR yes 116694022 3850 114135813
chr11 116697872 116697882 ETV4 JASPAR yes 116694022 3850 114135814
chr11 116697872 116697882 ETV5 JASPAR yes 116694022 3850 114135815
chr11 116697872 116697882 ETV6 JASPAR yes 116694022 3850 114135816
chr11 116697872 116697882 FEV JASPAR yes 116694022 3850 114135817
chr11 116697872 116697882 FLI1 JASPAR yes 116694022 3850 114135818
chr11 116697872 116697882 GABPA JASPAR yes 116694022 3850 114135819
chr11 116697872 116697883 ELF5 JASPAR yes 116694022 3850 114135820
chr11 116697872 116697884 EHF JASPAR yes 116694022 3850 114135821
chr11 116697872 116697884 ELF1 JASPAR yes 116694022 3850 114135822
chr11 116697872 116697884 ELF4 JASPAR yes 116694022 3850 114135823
chr11 116697872 116697885 ELF1 JASPAR yes 116694022 3850 114135824
chr11 116697873 116697881 FEV JASPAR yes 116694022 3851 114135825
chr11 116697873 116697882 ELK4 JASPAR yes 116694022 3851 114135826
chr11 116697874 116697880 ETS1 JASPAR yes 116694022 3852 114135827
chr11 116697874 116697880 SPI1 JASPAR yes 116694022 3852 114135828
chr11 116697874 116697884 ELK1 JASPAR yes 116694022 3852 114135829
chr11 116697887 116697897 TBX21 JASPAR yes 116694022 3865 114135830
chr11 116697887 116697898 TBX20 JASPAR yes 116694022 3865 114135831
chr11 116697887 116697900 EOMES JASPAR yes 116694022 3865 114135832
chr11 116697901 116697916 TFAP2A JASPAR yes 116694022 3879 114135833
chr11 116697901 116697916 TFAP2C JASPAR yes 116694022 3879 114135834
chr11 116697911 116697924 SCRT2 JASPAR yes 116694022 3889 114135835
chr11 116697911 116697926 SCRT1 JASPAR yes 116694022 3889 114135836
chr11 116697928 116698014 ZNF274 GTRD no Liver (HepG2) 116694022 3906 108000039
SNPs associated with APOA4[ENSG00000110244.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr11 116680448 rs2849169 C A 10971 Heart 0.00098837 2289679
chr11 116256796 rs77426137 C T 434623 Spleen 0.402825 2286973
chr11 116942753 rs7928320 C G,T 248731 Thyroid 0.165238 2291795
chr11 117604479 rs4142636 T C 910457 Liver 0.425659 2294845
chr11 116965752 rs12271628 T G 271730 Stomach 0.361972 2292094
chr11 117596906 rs144747590 T A 902884 Adrenal 0.40421 2294795
Details of APOA4[ENSG00000110244.5]
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Genomic Location chr11:116691419-116694022[-]
TSS 116694022
Gene Name APOA4
Ensembl ID ENSG00000110244.5
ENTREZID 337
Uniprot
Protein Name
APOA4 protein
Apolipoprotein A-IV
Expression levels of APOA4[ENSG00000110244.5]
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