EnhancerDB
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Enhancers that regulate RPS13[ENSG00000110700.2]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr11 16997125 17011895 enh13816 17099334 87439
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Ovary Esophagus Astrocyte Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Blood (T-cell) Heart
chr11 17008586 17008989 vista9780 17099334 90345
VISTA
chr11 17012560 17031895 enh13817 17099334 67439
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Esophagus Stomach Placenta Thyroid Lung (PC-9) Pancreas Heart
chr11 17036768 17036996 vista9781 17099334 62338
VISTA
chr11 17040505 17045335 enh13818 17099334 53999
Placenta Epithelial (MCF-7)
chr11 17056325 17062515 enh13819 17099334 36819
Pancreas Placenta
chr11 17067865 17072975 enh13820 17099334 26359
Pancreas Placenta Stomach Lung (PC-9)
chr11 17099866 17100401 vista9782 17099334 532
VISTA
chr11 17164162 17164523 vista9783 17099334 64828
VISTA
chr11 17172565 17176715 enh103463 17099334 73231
Peripheral Blood (MM.1S)
chr11 17181118 17188715 enh50740 17099334 81784
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Lung (PC-9) Spleen Uterus Blood (T-cell) Heart
chr11 17183931 17184277 vista9784 17099334 84597
VISTA
chr11 17191485 17195959 enh13821 17099334 92151
Astrocyte Placenta Neural Stem Cells (H9) Bone (Osteoblast)
Transcript facotrs that regulate RPS13[ENSG00000110700.2]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr11 17097548 17100238 POLR2A UCSC Txn Factor no Conserved 17099334 904 107960705
chr11 17098886 17100093 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 17099334 448 107960706
chr11 17099355 17099951 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 17099334 21 107960707
chr11 17099382 17099958 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 17099334 48 107960708
chr11 17099389 17099873 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 17099334 55 107960709
chr11 17099540 17099950 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 17099334 206 107960710
chr11 17099585 17100089 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 17099334 251 107960711
chr11 17099625 17100061 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 17099334 291 107960712
chr11 17099701 17100045 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 17099334 367 107960713
chr11 17099870 17099874 LFA1 TRANSFAC yes 17099334 536 114047670
chr11 17099908 17099920 E2F8 JASPAR yes 17099334 574 114047671
chr11 17099911 17099916 SP1 TRANSFAC yes 17099334 577 114047672
chr11 17099911 17099920 THAP1 JASPAR yes 17099334 577 114047673
chr11 17099912 17100312 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 17099334 578 107960714
chr11 17099914 17099918 LFA1 TRANSFAC yes 17099334 580 114047674
chr11 17099919 17099924 ETS2 TRANSFAC yes 17099334 585 114047675
chr11 17099938 17099953 HNF4G JASPAR yes 17099334 604 114047676
chr11 17099939 17099953 NR2F1 JASPAR yes 17099334 605 114047677
chr11 17099939 17099954 HNF4A JASPAR yes 17099334 605 114047678
chr11 17099942 17099948 TCF4 TRANSFAC yes 17099334 608 114047679
chr11 17099946 17099964 RARA JASPAR yes 17099334 612 114047680
chr11 17099953 17099974 ZNF263 JASPAR yes 17099334 619 114047681
chr11 17099956 17099977 ZNF263 JASPAR yes 17099334 622 114047682
chr11 17099963 17099968 GATA2 JASPAR yes 17099334 629 114047683
chr11 17099976 17099980 YY1 TRANSFAC yes 17099334 642 114047684
chr11 17099983 17099997 E2F7 JASPAR yes 17099334 649 114047685
chr11 17099984 17099996 E2F8 JASPAR yes 17099334 650 114047686
chr11 17099991 17100005 STAT1 JASPAR yes 17099334 657 114047687
chr11 17099991 17100006 STAT2 JASPAR yes 17099334 657 114047688
chr11 17100007 17100012 ETS2 TRANSFAC yes 17099334 673 114047689
chr11 17100012 17100033 IRF1 JASPAR yes 17099334 678 114047690
chr11 17100017 17100032 FOXP1 JASPAR yes 17099334 683 114047691
chr11 17100018 17100033 FOXP1 JASPAR yes 17099334 684 114047692
chr11 17100019 17100034 FOXP1 JASPAR yes 17099334 685 114047693
chr11 17100020 17100035 FOXP1 JASPAR yes 17099334 686 114047694
chr11 17100035 17100056 IRF1 JASPAR yes 17099334 701 114047695
chr11 17100039 17100054 IRF9 JASPAR yes 17099334 705 114047696
chr11 17100097 17100105 SP1 TRANSFAC yes 17099334 763 114047697
chr11 17100097 17100107 SP1 JASPAR yes 17099334 763 114047698
chr11 17100175 17100190 MEF2A JASPAR yes 17099334 841 114047699
chr11 17100176 17100191 MEF2C JASPAR yes 17099334 842 114047700
chr11 17100183 17100198 MEF2A JASPAR yes 17099334 849 114047701
chr11 17100184 17100199 MEF2C JASPAR yes 17099334 850 114047702
chr11 17100185 17100197 MEF2A JASPAR yes 17099334 851 114047703
chr11 17100185 17100197 MEF2B JASPAR yes 17099334 851 114047704
chr11 17100185 17100197 MEF2D JASPAR yes 17099334 851 114047705
chr11 17100187 17100191 YY1 TRANSFAC yes 17099334 853 114047706
chr11 17100203 17100213 REL JASPAR yes 17099334 869 114047707
chr11 17100203 17100214 NFKB1 JASPAR yes 17099334 869 114047708
chr11 17100206 17100216 NFATC3 JASPAR yes 17099334 872 114047709
chr11 17100207 17100214 NFATC2 JASPAR yes 17099334 873 114047710
chr11 17100214 17100234 PPARG JASPAR yes 17099334 880 114047711
chr11 17100217 17100237 ESR1 JASPAR yes 17099334 883 114047712
chr11 17100218 17100222 ESR1 TRANSFAC yes 17099334 884 114047713
chr11 17100244 17100254 SREBF2 JASPAR yes 17099334 910 114047714
chr11 17100244 17100255 USF1 JASPAR yes 17099334 910 114047715
chr11 17100244 17100255 USF2 JASPAR yes 17099334 910 114047716
chr11 17100254 17100259 SP1 TRANSFAC yes 17099334 920 114047717
chr11 17100257 17100271 PLAG1 JASPAR yes 17099334 923 114047718
chr11 17100293 17100304 FOSL2 JASPAR yes 17099334 959 114047719
chr11 17100308 17100318 ELK1 JASPAR yes 17099334 974 114047720
chr11 17100310 17100321 ELK4 JASPAR yes 17099334 976 114047721
chr11 17100312 17100318 ETS1 JASPAR yes 17099334 978 114047722
chr11 17100312 17100318 SPI1 JASPAR yes 17099334 978 114047723
chr11 17100337 17100356 RFX2 JASPAR yes 17099334 1003 114047724
chr11 17100344 17100348 LFA1 TRANSFAC yes 17099334 1010 114047725
chr11 17100347 17100359 YY1 JASPAR yes 17099334 1013 114047726
chr11 17100349 17100360 YY2 JASPAR yes 17099334 1015 114047727
chr11 17100350 17100362 HLF JASPAR yes 17099334 1016 114047728
chr11 17100365 17100380 MEF2C JASPAR yes 17099334 1031 114047729
chr11 17100366 17100381 MEF2A JASPAR yes 17099334 1032 114047730
chr11 17100367 17100379 MEF2A JASPAR yes 17099334 1033 114047731
chr11 17100367 17100379 MEF2B JASPAR yes 17099334 1033 114047732
chr11 17100367 17100379 MEF2D JASPAR yes 17099334 1033 114047733
chr11 17100369 17100373 TEAD2 TRANSFAC yes 17099334 1035 114047734
chr11 17100369 17100374 TBP TRANSFAC yes 17099334 1035 114047735
chr11 17100369 17100375 TMF TRANSFAC yes 17099334 1035 114047736
chr11 17100376 17100382 SOX10 JASPAR yes 17099334 1042 114047737
SNPs associated with RPS13[ENSG00000110700.2], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr11 17058031 rs79681121 A G 37905 Esophagus 0.186487 1880378
chr11 17058031 rs79681121 A G 37905 Esophagus 3.22887e-05 1880378
chr11 17058031 rs79681121 A G 37905 Heart 0.0472269 1880378
chr11 17705356 rs77396732 C A,T 606022 Pancreas 0.0722472 1882172
chr11 17058031 rs79681121 A G 37905 Breast 1.70286e-18 1880378
chr11 17058031 rs79681121 A G 37905 Ovary 0.0416269 1880378
chr11 16886263 rs61882018 G A 209673 Uterus 0.262832 1878672
chr11 16844924 rs4756865 G A 251012 Liver 0.186538 1878365
chr11 17099213 rs78520678 G A 0 Lung 4.64231e-21 1880562
chr11 17058031 rs79681121 A G 37905 Stomach 0.0028341 1880378
Details of RPS13[ENSG00000110700.2]
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Genomic Location chr11:17095936-17099334[-]
TSS 17099334
Gene Name RPS13
Ensembl ID ENSG00000110700.2
ENTREZID 6207
Uniprot
P62277
Protein Name
40S ribosomal protein S13
Expression levels of RPS13[ENSG00000110700.2]
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