EnhancerDB
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Enhancers that regulate RFC5[ENSG00000111445.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 118360745 118364895 enh96365 118451393 86498
Epithelial (MCF-7)
chr12 118370955 118375285 enh86148 118451393 76108
Colon (HCT116)
chr12 118389495 118393745 enh80410 118451393 57648
Prostate (PC-3) Lung (PC-9) Colon (HCT116)
chr12 118410945 118430500 enh15032 118451393 20893
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast)
chr12 118466445 118466738 vista15075 118451393 15052
VISTA
chr12 118481507 118485827 enh86957 118451393 30114
Blood (GM12878)
chr12 118488254 118496415 enh30015 118451393 36861
Prostate (PC-3) Liver (HepG2) Esophagus Astrocyte Stomach Colon (HCT116) Thyroid Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Heart
chr12 118497379 118497776 vista15076 118451393 45986
VISTA
chr12 118497859 118498236 vista15077 118451393 46466
VISTA
chr12 118524413 118529606 enh51421 118451393 73020
Colon (HCT116) Large Intestine Lung (A549)
chr12 118533925 118548261 enh15033 118451393 82532
Prostate (RWPE1) Placenta Colon (HCT116) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript facotrs that regulate RFC5[ENSG00000111445.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with RFC5[ENSG00000111445.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 117844039 rs1107370 C T 607354 Esophagus 0.284786 2934459
chr12 118279829 rs200683591 A AG 171564 Heart 0.383183 2936096
chr12 118117746 rs7294385 T C 333647 Pancreas 0.332666 2935294
chr12 118102046 rs398098530 A ACCC 349347 Spleen 0.263752 2935239
chr12 117458859 rs7308734 G A 992534 Uterus 0.0340731 2932339
chr12 119313910 rs11069143 T G 842975 Liver 0.15376 2939970
chr12 118415998 rs4415868 G A 35395 Lung 0.262036 2936874
chr12 118430339 rs137904613 C T 21054 Adrenal 0.264414 2937091
Details of RFC5[ENSG00000111445.9]
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Genomic Location chr12:118451393-118470935[+]
TSS 118451393
Gene Name RFC5
Ensembl ID ENSG00000111445.9
ENTREZID 5985
Uniprot
Q59GW7
P40937
Protein Name
RFC5 protein
Replication factor C subunit 5
Expression levels of RFC5[ENSG00000111445.9]
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