EnhancerDB
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Enhancers that regulate CNOT2[ENSG00000111596.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 70558769 70558849 vista13980 70636774 77925
VISTA
chr12 70568185 70572335 enh51272 70636774 64439
Large Intestine
chr12 70571892 70572118 vista13981 70636774 64656
VISTA
chr12 70581965 70586695 enh75076 70636774 50079
Muscle (A673) Brain (SK-N-MC) Lung (PC-9)
chr12 70589205 70593375 enh75077 70636774 43399
Muscle (A673) Brain (SK-N-MC)
chr12 70603919 70603997 vista13982 70636774 32777
VISTA
chr12 70605032 70605426 vista13983 70636774 31348
VISTA
chr12 70609305 70613455 enh51273 70636774 23319
Large Intestine
chr12 70626158 70626373 vista13984 70636774 10401
VISTA
chr12 70630767 70631060 vista13985 70636774 5714
VISTA
chr12 70633612 70633702 vista13986 70636774 3072
VISTA
chr12 70634012 70634396 vista13987 70636774 2378
VISTA
chr12 70641745 70670275 enh2438 70636774 4971
Liver (HepG2) Large Intestine Astrocyte Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Uterus Epithelial (MCF-7)
chr12 70644560 70644959 vista13988 70636774 7786
VISTA
chr12 70648828 70649035 vista13989 70636774 12054
VISTA
chr12 70650618 70650832 vista13990 70636774 13844
VISTA
chr12 70697025 70701235 enh107550 70636774 60251
Blood (T-cell)
Transcript facotrs that regulate CNOT2[ENSG00000111596.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr12 70633613 70633628 FOXP1 JASPAR yes 70636774 3146 82432043
chr12 70633614 70633625 FOXA1 JASPAR yes 70636774 3149 82432044
chr12 70633614 70633629 FOXA1 JASPAR yes 70636774 3145 82432045
chr12 70633615 70633627 FOXC2 JASPAR yes 70636774 3147 82432046
chr12 70633616 70633627 FOXP2 JASPAR yes 70636774 3147 82432047
chr12 70633624 70633639 FOXP1 JASPAR yes 70636774 3135 82432048
chr12 70633625 70633636 FOXA1 JASPAR yes 70636774 3138 82432049
chr12 70633625 70633636 FOXH1 JASPAR yes 70636774 3138 82432050
chr12 70633625 70633640 FOXA1 JASPAR yes 70636774 3134 82432051
chr12 70633626 70633637 FOXC1 JASPAR yes 70636774 3137 82432052
chr12 70633626 70633638 FOXC2 JASPAR yes 70636774 3136 82432053
chr12 70633627 70633638 FOXP2 JASPAR yes 70636774 3136 82432054
chr12 70633629 70633637 FOXG1 JASPAR yes 70636774 3137 82432055
chr12 70633629 70633637 FOXO3 JASPAR yes 70636774 3137 82432056
chr12 70633641 70633657 POU4F3 JASPAR yes 70636774 3117 82432057
chr12 70633643 70633657 POU4F1 JASPAR yes 70636774 3117 82432058
chr12 70633644 70633658 POU4F1 JASPAR yes 70636774 3116 82432059
chr12 70633644 70633660 POU4F2 JASPAR yes 70636774 3114 82432060
chr12 70633644 70633660 POU4F3 JASPAR yes 70636774 3114 82432061
chr12 70633650 70633654 TEAD2 TRANSFAC yes 70636774 3120 82432062
chr12 70633650 70633655 TBP TRANSFAC yes 70636774 3119 82432063
chr12 70633650 70633656 TMF TRANSFAC yes 70636774 3118 82432064
chr12 70633660 70633675 FOXP1 JASPAR yes 70636774 3099 82432065
chr12 70633675 70633679 LFA1 TRANSFAC yes 70636774 3095 82432066
chr12 70633675 70633685 MAX JASPAR yes 70636774 3089 82432067
chr12 70633675 70633686 USF2 JASPAR yes 70636774 3088 82432068
chr12 70633676 70633686 BHLHE40 JASPAR yes 70636774 3088 82432069
chr12 70633676 70633686 BHLHE41 JASPAR yes 70636774 3088 82432070
chr12 70633676 70633686 MAX JASPAR yes 70636774 3088 82432071
chr12 70633676 70633686 MLXIPL JASPAR yes 70636774 3088 82432072
chr12 70633676 70633686 MLX JASPAR yes 70636774 3088 82432073
chr12 70633676 70633686 MNT JASPAR yes 70636774 3088 82432074
chr12 70633676 70633686 SREBF2 JASPAR yes 70636774 3088 82432075
chr12 70633676 70633686 TFE3 JASPAR yes 70636774 3088 82432076
chr12 70633676 70633686 TFEB JASPAR yes 70636774 3088 82432077
chr12 70633676 70633686 TFEC JASPAR yes 70636774 3088 82432078
chr12 70633676 70633687 USF1 JASPAR yes 70636774 3087 82432079
chr12 70633676 70633687 USF2 JASPAR yes 70636774 3087 82432080
chr12 70633677 70633687 MAX JASPAR yes 70636774 3087 82432081
chr12 70633678 70633683 MYC TRANSFAC yes 70636774 3091 82432082
chr12 70633678 70633683 USF1 TRANSFAC yes 70636774 3091 82432083
chr12 70633678 70633683 USF2 TRANSFAC yes 70636774 3091 82432084
chr12 70633685 70633692 MEIS1 JASPAR yes 70636774 3082 82432085
chr12 70633685 70633693 MEIS2 JASPAR yes 70636774 3081 82432086
chr12 70634018 70634024 YY1 JASPAR yes 70636774 2750 82432087
chr12 70634018 70634035 BCL6B JASPAR yes 70636774 2739 82432088
chr12 70634050 70634058 HOXA5 JASPAR yes 70636774 2716 82432089
chr12 70634056 70634062 NFIC JASPAR yes 70636774 2712 82432090
chr12 70634075 70634081 YY1 JASPAR yes 70636774 2693 82432091
chr12 70634086 70634098 TEAD1 JASPAR yes 70636774 2676 82432092
chr12 70634102 70634107 GATA2 JASPAR yes 70636774 2667 82432093
chr12 70634107 70634112 ETS2 TRANSFAC yes 70636774 2662 82432094
chr12 70634120 70634125 MYB TRANSFAC yes 70636774 2649 82432095
chr12 70634138 70634142 NFE TRANSFAC yes 70636774 2632 82432096
chr12 70634138 70634143 GATA1 TRANSFAC yes 70636774 2631 82432097
chr12 70634138 70634144 GATA3 JASPAR yes 70636774 2630 82432098
chr12 70634154 70634165 HOXC12 JASPAR yes 70636774 2609 82432099
chr12 70634154 70634165 HOXC13 JASPAR yes 70636774 2609 82432100
chr12 70634165 70634179 CREB3L1 JASPAR yes 70636774 2595 82432101
chr12 70634166 70634177 USF2 JASPAR yes 70636774 2597 82432102
chr12 70634167 70634177 TFEB JASPAR yes 70636774 2597 82432103
chr12 70634167 70634177 TFEC JASPAR yes 70636774 2597 82432104
chr12 70634177 70634188 NRL JASPAR yes 70636774 2586 82432105
chr12 70634219 70634224 ETS2 TRANSFAC yes 70636774 2550 82432106
chr12 70634219 70634227 EHF JASPAR yes 70636774 2547 82432107
chr12 70634241 70634247 LEF1 TRANSFAC yes 70636774 2527 82432108
chr12 70634241 70634247 SOX10 JASPAR yes 70636774 2527 82432109
chr12 70634257 70634268 DMRT3 JASPAR yes 70636774 2506 82432110
chr12 70634261 70634266 GATA2 JASPAR yes 70636774 2508 82432111
chr12 70634283 70634295 YY1 JASPAR yes 70636774 2479 82432112
chr12 70634288 70635246 ZNF143 GTRD no Epithelial (MCF-7) 70636774 1528 108044102
chr12 70634289 70634295 PEA3 TRANSFAC yes 70636774 2479 82432113
chr12 70634300 70634305 TFAP2A TRANSFAC yes 70636774 2469 82432114
chr12 70634300 70634306 MZF1 JASPAR yes 70636774 2468 82432115
chr12 70634310 70634313 MYB TRANSFAC yes 70636774 2461 82432116
chr12 70634326 70634341 MEF2C JASPAR yes 70636774 2433 82432117
chr12 70634353 70634367 SPI1 JASPAR yes 70636774 2407 82432118
chr12 70634354 70634375 ZNF263 JASPAR yes 70636774 2399 82432119
chr12 70634358 70634379 ZNF263 JASPAR yes 70636774 2395 82432120
chr12 70634380 70634391 ELK4 JASPAR yes 70636774 2383 82432121
chr12 70634380 70634391 FLI1 JASPAR yes 70636774 2383 82432122
chr12 70634381 70634391 ELK3 JASPAR yes 70636774 2383 82432123
chr12 70634381 70634391 ERF JASPAR yes 70636774 2383 82432124
chr12 70634381 70634391 ERG JASPAR yes 70636774 2383 82432125
chr12 70634381 70634391 ETS1 JASPAR yes 70636774 2383 82432126
chr12 70634381 70634391 ETV6 JASPAR yes 70636774 2383 82432127
chr12 70634381 70634391 FEV JASPAR yes 70636774 2383 82432128
chr12 70634381 70634391 FLI1 JASPAR yes 70636774 2383 82432129
chr12 70634381 70634391 GABPA JASPAR yes 70636774 2383 82432130
chr12 70634381 70634392 ETV2 JASPAR yes 70636774 2382 82432131
chr12 70634381 70634394 ELF1 JASPAR yes 70636774 2380 82432132
chr12 70634382 70634389 SPI1 JASPAR yes 70636774 2385 82432133
chr12 70634382 70634390 EHF JASPAR yes 70636774 2384 82432134
chr12 70634382 70634390 FEV JASPAR yes 70636774 2384 82432135
chr12 70634385 70635241 ZNF143 GTRD no Epithelial (MCF-7) 70636774 1533 108044103
chr12 70641752 70641757 ETS2 TRANSFAC yes 70636774 4978 121763766
SNPs associated with CNOT2[ENSG00000111596.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 70493073 rs73335693 A C 143701 Esophagus 0.0509185 2720898
chr12 70234794 rs74610421 A T 401980 Esophagus 0.0586877 2719086
chr12 70401149 rs1239930 A C 235625 Heart 0.134076 2720372
chr12 70663820 rs77527481 A G 0 Thyroid 0.0166473 2721588
chr12 69922167 rs143477297 C T 714607 Stomach 0.2905 2717927
Details of CNOT2[ENSG00000111596.7]
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Genomic Location chr12:70636774-70748773[+]
TSS 70636774
Gene Name CNOT2
Ensembl ID ENSG00000111596.7
ENTREZID 4848
Uniprot
F8VV52
B3KTL6
Q9NZN8
B2RDX7
A0A024RBD8
Protein Name
isoform CRA_c
subunit 2
CCR4-NOT transcription complex
CCR4-NOT transcription complex subunit 2
Expression levels of CNOT2[ENSG00000111596.7]
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