EnhancerDB
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Enhancers that regulate SUDS3[ENSG00000111707.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 118724065 118728215 enh90983 118814185 85970
Bone Marrow (K562)
chr12 118736225 118755875 enh2628 118814185 58310
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Blood (Karpas-422) Lung (PC-9) Uterus Epithelial (MCF-7)
chr12 118744725 118745093 vista15081 118814185 69092
VISTA
chr12 118745418 118745709 vista15082 118814185 68476
VISTA
chr12 118762905 118786895 enh2629 118814185 27290
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Thyroid Blood (Karpas-422) Spleen Stomach
chr12 118784975 118784984 vista15083 118814185 29201
VISTA
chr12 118790825 118795995 enh30016 118814185 18190
Astrocyte Cervix (HeLa-S3) Stomach
chr12 118795182 118795561 vista15084 118814185 18624
VISTA
chr12 118796576 118804815 enh75186 118814185 9370
Muscle (A673) Colon (HCT116)
chr12 118815733 118815925 vista15085 118814185 1548
VISTA
chr12 118854265 118865015 enh80411 118814185 40080
Prostate (PC-3)
chr12 118865625 118872964 enh43837 118814185 51440
Thyroid Muscle (Myotube) Stomach
Transcript facotrs that regulate SUDS3[ENSG00000111707.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr12 118815511 118816031 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 118814185 1326 108062321
chr12 118815677 118816071 CTCF UCSC Txn Factor no Conserved 118814185 1492 108062322
chr12 118815680 118816040 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 118814185 1495 108062323
chr12 118815680 118816080 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 118814185 1495 108062324
chr12 118815698 118816078 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 118814185 1513 108062325
chr12 118815706 118816116 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 118814185 1521 108062326
chr12 118815715 118815959 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 118814185 1530 108062327
chr12 118815715 118816034 RAD21 UCSC Txn Factor no Conserved 118814185 1530 108062328
chr12 118815722 118816052 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 118814185 1537 108062329
chr12 118815734 118815739 TFAP2A TRANSFAC yes 118814185 1549 82486132
chr12 118815734 118815740 MZF1 JASPAR yes 118814185 1549 82486133
chr12 118815744 118816014 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 118814185 1559 108062330
chr12 118815745 118816005 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 118814185 1560 108062331
chr12 118815746 118816016 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 118814185 1561 108062332
chr12 118815748 118816038 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 118814185 1563 108062333
chr12 118815750 118816040 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 118814185 1565 108062334
chr12 118815756 118816026 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 118814185 1571 108062335
chr12 118815765 118816009 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 118814185 1580 108062336
chr12 118815765 118816035 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 118814185 1580 108062337
chr12 118815766 118815776 ID4 JASPAR yes 118814185 1581 82486134
chr12 118815769 118815999 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 118814185 1584 108062338
chr12 118815772 118815785 POU2F2 JASPAR yes 118814185 1587 82486135
chr12 118815774 118816004 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 118814185 1589 108062339
chr12 118815776 118816000 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 118814185 1591 108062340
chr12 118815788 118815794 SOX10 JASPAR yes 118814185 1603 82486136
chr12 118815791 118815948 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 118814185 1606 108062341
chr12 118815797 118815935 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 118814185 1612 108062342
chr12 118815798 118815988 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 118814185 1613 108062343
chr12 118815799 118815975 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 118814185 1614 108062344
chr12 118815801 118815956 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 118814185 1616 108062345
chr12 118815803 118815892 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 118814185 1618 108062346
chr12 118815805 118815975 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 118814185 1620 108062347
chr12 118815813 118815826 DUXA JASPAR yes 118814185 1628 82486137
chr12 118815814 118815825 DUX4 JASPAR yes 118814185 1629 82486138
chr12 118815837 118815840 MYB TRANSFAC yes 118814185 1652 82486139
chr12 118815879 118815898 CTCF JASPAR yes 118814185 1694 82486140
chr12 118815910 118815925 STAT2 JASPAR yes 118814185 1725 82486141
chr12 118815911 118815925 STAT1 JASPAR yes 118814185 1726 82486142
SNPs associated with SUDS3[ENSG00000111707.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 118765070 rs11068908 C T 49115 Esophagus 5.49422e-05 2938389
chr12 118802448 rs2036489 G C 11737 Esophagus 3.69141e-05 2938682
chr12 118005541 rs11609159 A G 808644 Heart 0.32621 2935030
chr12 118800759 rs793596 G A 13426 Heart 0.144094 2938670
chr12 118795293 rs7296216 G T 18892 Pancreas 0.00462721 2938629
chr12 118864993 rs11068943 A G 9153 Spleen 0.00487217 2938917
chr12 118795293 rs7296216 G T 18892 Lung 2.24394e-06 2938629
chr12 118792730 rs11068919 G A 21455 Stomach 0.13781 2938603
Details of SUDS3[ENSG00000111707.7]
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Genomic Location chr12:118814185-118855840[+]
TSS 118814185
Gene Name SUDS3
Ensembl ID ENSG00000111707.7
ENTREZID 64426
Uniprot
Q9H7L9
Protein Name
SUDS3 protein
Sin3 histone deacetylase corepressor complex component SDS3
Expression levels of SUDS3[ENSG00000111707.7]
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