EnhancerDB
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Enhancers that regulate FAM46A[ENSG00000112773.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 82376485 82382435 enh66238 82462491 80056
Heart
chr6 82389805 82402035 enh23380 82462491 60456
Muscle (A673) Placenta Cervix (HeLa-S3) Brain (SK-N-MC)
chr6 82403525 82409575 enh23381 82462491 52916
Cervix (HeLa-S3) Placenta Lung (PC-9) Neural Stem Cells (H9) Stomach
chr6 82412505 82420334 enh72330 82462491 42157
Muscle (A673) Neural Stem Cells (H9)
chr6 82421065 82425215 enh23382 82462491 37276
Placenta
chr6 82422345 82422435 vista52603 82462491 40056
VISTA
chr6 82441905 82453835 enh23383 82462491 8656
Placenta
chr6 82444623 82444816 vista52604 82462491 17675
VISTA
chr6 82467705 82489855 enh23384 82462491 5214
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Lung (PC-9) Pancreas Epithelial (MCF-7)
chr6 82493145 82501991 enh39196 82462491 30654
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Stomach Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 82507185 82511335 enh97865 82462491 44694
Epithelial (MCF-7)
chr6 82514605 82521135 enh84264 82462491 52114
Prostate (PC-3) Uterus Epithelial (MCF-7)
chr6 82522164 82522345 vista52605 82462491 59673
VISTA
chr6 82522485 82534575 enh23385 82462491 59994
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Stomach Placenta Epithelial (MCF-7)
chr6 82530793 82531077 vista52606 82462491 68302
VISTA
chr6 82539185 82550035 enh23386 82462491 76694
Cervix (HeLa-S3) Astrocyte Stomach Placenta Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
chr6 82547816 82548067 vista52607 82462491 85325
VISTA
chr6 82550105 82559855 enh93513 82462491 87614
Liver (HepG2) Adrenal
chr6 82554529 82554698 vista52608 82462491 92038
VISTA
Transcript facotrs that regulate FAM46A[ENSG00000112773.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with FAM46A[ENSG00000112773.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 82621683 rs11963690 T C 159192 Esophagus 0.0506691 9158214
chr6 82604355 rs397696315 AAAG A 141864 Esophagus 0.0216194 9158045
chr6 82485780 rs77354260 T A 23289 Esophagus 0.0539593 9157129
chr6 82618257 rs17674719 C G 155766 Pancreas 0.303713 9158168
chr6 82725586 rs7741179 T C 263095 Thyroid 0.0620846 9158741
Details of FAM46A[ENSG00000112773.11]
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Genomic Location chr6:82201156-82462491[-]
TSS 82462491
Gene Name FAM46A
Ensembl ID ENSG00000112773.11
ENTREZID 55603
Uniprot
Q96IP4
Protein Name
isoform CRA_a
member A
Alternative protein FAM46A
Family with sequence similarity 46
Family with sequence similarity 46 member A
Protein FAM46A
Expression levels of FAM46A[ENSG00000112773.11]
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