EnhancerDB
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Enhancers that regulate RARS[ENSG00000113643.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr5 167815455 167819865 enh59567 167913450 93585
Pancreas Skin (Keratinocyte) Prostate (PC-3)
chr5 167826349 167837812 enh22782 167913450 75638
Prostate (PC-3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
chr5 167859011 167864330 enh38638 167913450 49120
Astrocyte Brain (SK-N-SH) Bone (Osteoblast)
chr5 167874265 167878455 enh97795 167913450 34995
Lung (PC-9) Epithelial (MCF-7)
chr5 167899420 167906472 enh102785 167913450 6978
Brain (SK-N-SH) Bone (Osteoblast)
chr5 167909535 167909826 vista50025 167913450 3624
VISTA
chr5 167961977 167962275 vista50026 167913450 48527
VISTA
chr5 168012305 168030115 enh72112 167913450 98855
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Liver Adrenal Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript facotrs that regulate RARS[ENSG00000113643.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr5 167909542 167909556 MTF1 JASPAR yes 167913450 3894 70756230
chr5 167909561 167909567 SOX10 JASPAR yes 167913450 3883 70756231
chr5 167909574 167909592 MAFF JASPAR yes 167913450 3858 70756232
chr5 167909576 167909587 NRL JASPAR yes 167913450 3863 70756233
chr5 167909576 167909591 MAFK JASPAR yes 167913450 3859 70756234
chr5 167909576 167909597 MAFG JASPAR yes 167913450 3853 70756235
chr5 167909584 167909601 ESR1 JASPAR yes 167913450 3849 70756236
chr5 167909584 167909602 ESR2 JASPAR yes 167913450 3848 70756237
chr5 167909596 167909614 IRF2 JASPAR yes 167913450 3836 70756238
chr5 167909599 167909602 MYB TRANSFAC yes 167913450 3848 70756239
chr5 167909599 167909614 STAT2 JASPAR yes 167913450 3836 70756240
chr5 167909606 167909610 YY1 TRANSFAC yes 167913450 3840 70756241
chr5 167909613 167909617 NFE TRANSFAC yes 167913450 3833 70756242
chr5 167909614 167909626 NHLH1 JASPAR yes 167913450 3824 70756243
chr5 167909615 167909625 TFAP4 JASPAR yes 167913450 3825 70756244
chr5 167909642 167909663 ZNF263 JASPAR yes 167913450 3787 70756245
chr5 167909651 167909665 JUN JASPAR yes 167913450 3785 70756246
chr5 167909654 167909665 FOSL2 JASPAR yes 167913450 3785 70756247
chr5 167909654 167909665 JUNB JASPAR yes 167913450 3785 70756248
chr5 167909655 167909663 FOXC1 JASPAR yes 167913450 3787 70756249
chr5 167909655 167909666 FOSL1 JASPAR yes 167913450 3784 70756250
chr5 167909655 167909666 JUND JASPAR yes 167913450 3784 70756251
chr5 167909657 167909663 JUN TRANSFAC yes 167913450 3787 70756252
chr5 167909683 167909688 GATA2 JASPAR yes 167913450 3762 70756253
chr5 167909715 167909724 ZEB1 JASPAR yes 167913450 3726 70756254
chr5 167909720 167909741 IRF1 JASPAR yes 167913450 3709 70756255
chr5 167909725 167909743 IRF2 JASPAR yes 167913450 3707 70756256
chr5 167909725 167909746 ZNF263 JASPAR yes 167913450 3704 70756257
chr5 167909726 167909747 IRF1 JASPAR yes 167913450 3703 70756258
chr5 167909729 167909750 ZNF263 JASPAR yes 167913450 3700 70756259
chr5 167909730 167909742 IRF1 JASPAR yes 167913450 3708 70756260
chr5 167909730 167909744 IRF7 JASPAR yes 167913450 3706 70756261
chr5 167909739 167909744 ETS2 TRANSFAC yes 167913450 3706 70756262
chr5 167909762 167909772 MZF1 JASPAR yes 167913450 3678 70756263
chr5 167909765 167909771 SP1 TRANSFAC yes 167913450 3679 70756264
chr5 167909767 167909785 SRF JASPAR yes 167913450 3665 70756265
chr5 167909806 167909809 MYB TRANSFAC yes 167913450 3641 70756266
chr5 167909814 167909819 MYB TRANSFAC yes 167913450 3631 70756267
SNPs associated with RARS[ENSG00000113643.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr5 167264372 rs149803627 C T 649078 Esophagus 0.324574 8676039
chr5 167512002 rs17069810 G A 401448 Esophagus 0.377573 8677621
chr5 168861079 rs116508910 T C 914775 Pancreas 0.271792 8685586
chr5 167189612 rs10516038 T C 723838 Uterus 0.451228 8675496
chr5 167764388 rs58545200 C A,T 149062 Stomach 0.372871 8679394
Details of RARS[ENSG00000113643.4]
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Genomic Location chr5:167913450-167946304[+]
TSS 167913450
Gene Name RARS
Ensembl ID ENSG00000113643.4
ENTREZID 5917
Uniprot
P54136
Protein Name
cytoplasmic
Arginine--tRNA ligase
Expression levels of RARS[ENSG00000113643.4]
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