EnhancerDB
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  3. NR5A2[ENSG00000116833.9]
Enhancers that regulate NR5A2[ENSG00000116833.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 199908985 199913455 enh103185 199996730 83275
Peripheral Blood (MM.1S)
chr1 199914824 199914978 vista4501 199996730 81752
VISTA
chr1 199915218 199920384 enh85990 199996730 76346
Colon (HCT116)
chr1 199921943 199927368 enh67238 199996730 69362
Pancreas Neural Stem Cells (H9)
chr1 199942684 199950455 enh50132 199996730 46275
Blood (OCI-LY7) Neural Stem Cells (H9) Pancreas Large Intestine
chr1 199961134 199965314 enh57523 199996730 31416
Lung (A549)
chr1 199973945 199978095 enh50133 199996730 18635
Large Intestine
chr1 199982965 199988155 enh95957 199996730 8575
Epithelial (MCF-7)
chr1 200000805 200004955 enh50134 199996730 4075
Large Intestine
chr1 200005765 200009915 enh98594 199996730 9035
Uterus
chr1 200020865 200025015 enh50135 199996730 24135
Large Intestine
chr1 200039825 200047707 enh87663 199996730 43095
Stomach Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
chr1 200050544 200050911 vista4502 199996730 53814
VISTA
chr1 200057485 200061935 enh79327 199996730 60755
Prostate (PC-3)
chr1 200066305 200080015 enh50136 199996730 69575
Epithelial (MCF-7) Large Intestine Pancreas Uterus Stomach
chr1 200068069 200068443 vista4503 199996730 71339
VISTA
chr1 200076437 200076447 vista4504 199996730 79707
VISTA
chr1 200082785 200086935 enh108392 199996730 86055
Lung (PC-9)
chr1 200095345 200102955 enh57524 199996730 98615
Liver Lung (A549) Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript facotrs that regulate NR5A2[ENSG00000116833.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 200000823 200000836 TFAP2B JASPAR yes 199996730 4093 34409714
chr1 200000823 200000836 TFAP2C JASPAR yes 199996730 4093 34409715
chr1 200000832 200000842 NHLH1 JASPAR yes 199996730 4102 34409716
chr1 200000844 200000853 SNAI2 JASPAR yes 199996730 4114 34409717
chr1 200000844 200000854 ID4 JASPAR yes 199996730 4114 34409718
chr1 200000844 200000854 TCF3 JASPAR yes 199996730 4114 34409719
chr1 200000844 200000854 TCF4 JASPAR yes 199996730 4114 34409720
chr1 200000858 200000877 PAX5 JASPAR yes 199996730 4128 34409721
chr1 200000876 200000891 MEF2A JASPAR yes 199996730 4146 34409722
chr1 200000877 200000892 MEF2C JASPAR yes 199996730 4147 34409723
chr1 200000878 200000890 MEF2A JASPAR yes 199996730 4148 34409724
chr1 200000878 200000890 MEF2B JASPAR yes 199996730 4148 34409725
chr1 200000878 200000890 MEF2D JASPAR yes 199996730 4148 34409726
chr1 200000880 200000884 YY1 TRANSFAC yes 199996730 4150 34409727
chr1 200000890 200000896 HiNF-A TRANSFAC yes 199996730 4160 34409728
chr1 200000895 200000908 NFKB1 JASPAR yes 199996730 4165 34409729
chr1 200000895 200000908 NFKB2 JASPAR yes 199996730 4165 34409730
chr1 200000898 200000909 CEBPB JASPAR yes 199996730 4168 34409731
chr1 200000921 200000925 H4TF2 TRANSFAC yes 199996730 4191 34409732
chr1 200000934 200000942 CREB1 JASPAR yes 199996730 4204 34409733
chr1 200000938 200000948 SREBF2 JASPAR yes 199996730 4208 34409734
chr1 200000938 200000949 USF1 JASPAR yes 199996730 4208 34409735
chr1 200000938 200000949 USF2 JASPAR yes 199996730 4208 34409736
chr1 200000941 200000954 NFKB1 JASPAR yes 199996730 4211 34409737
chr1 200000946 200000952 ZNF354C JASPAR yes 199996730 4216 34409738
chr1 200000987 200000998 FOSL2 JASPAR yes 199996730 4257 34409739
chr1 200000995 200001003 TBX5 JASPAR yes 199996730 4265 34409740
chr1 200000995 200001004 ZEB1 JASPAR yes 199996730 4265 34409741
chr1 200000995 200001008 ZBTB18 JASPAR yes 199996730 4265 34409742
chr1 200000996 200001006 ID4 JASPAR yes 199996730 4266 34409743
chr1 200000996 200001006 TCF3 JASPAR yes 199996730 4266 34409744
chr1 200000996 200001006 TCF4 JASPAR yes 199996730 4266 34409745
chr1 200000998 200001003 USF2 TRANSFAC yes 199996730 4268 34409746
chr1 200001007 200001020 EOMES JASPAR yes 199996730 4277 34409747
chr1 200001009 200001019 TBR1 JASPAR yes 199996730 4279 34409748
chr1 200001009 200001020 TBX20 JASPAR yes 199996730 4279 34409749
chr1 200001009 200001020 TBX2 JASPAR yes 199996730 4279 34409750
chr1 200001010 200001020 TBX21 JASPAR yes 199996730 4280 34409751
chr1 200001011 200001014 MYB TRANSFAC yes 199996730 4281 34409752
chr1 200001011 200001019 MGA JASPAR yes 199996730 4281 34409753
chr1 200001011 200001019 TBX15 JASPAR yes 199996730 4281 34409754
chr1 200001011 200001019 TBX1 JASPAR yes 199996730 4281 34409755
chr1 200001011 200001019 TBX4 JASPAR yes 199996730 4281 34409756
chr1 200001011 200001019 TBX5 JASPAR yes 199996730 4281 34409757
chr1 200001023 200001026 MYB TRANSFAC yes 199996730 4293 34409758
chr1 200001045 200001052 SPIB JASPAR yes 199996730 4315 34409759
chr1 200001045 200001056 FLI1 JASPAR yes 199996730 4315 34409760
chr1 200001045 200001066 ZNF263 JASPAR yes 199996730 4315 34409761
chr1 200001046 200001054 EHF JASPAR yes 199996730 4316 34409762
chr1 200001079 200001096 RARA JASPAR yes 199996730 4349 34409763
chr1 200001079 200001096 RXRA JASPAR yes 199996730 4349 34409764
chr1 200001086 200001099 NR2F1 JASPAR yes 199996730 4356 34409765
chr1 200001116 200001124 OTX2 JASPAR yes 199996730 4386 34409766
chr1 200001160 200001175 ESR2 JASPAR yes 199996730 4430 34409767
chr1 200001161 200001165 LFA1 TRANSFAC yes 199996730 4431 34409768
chr1 200001174 200001193 CTCF JASPAR yes 199996730 4444 34409769
chr1 200001189 200001209 RREB1 JASPAR yes 199996730 4459 34409770
chr1 200001193 200001213 RREB1 JASPAR yes 199996730 4463 34409771
chr1 200001194 200001214 RREB1 JASPAR yes 199996730 4464 34409772
chr1 200001196 200001200 H1TF2 TRANSFAC yes 199996730 4466 34409773
chr1 200001196 200001200 NFE TRANSFAC yes 199996730 4466 34409774
chr1 200001196 200001200 SRF TRANSFAC yes 199996730 4466 34409775
chr1 200001200 200001206 MZF1 JASPAR yes 199996730 4470 34409776
chr1 200001201 200001211 SP1 JASPAR yes 199996730 4471 34409777
chr1 200001202 200001217 TFAP2A JASPAR yes 199996730 4472 34409778
chr1 200001202 200001217 TFAP2C JASPAR yes 199996730 4472 34409779
chr1 200001204 200001218 GLIS2 JASPAR yes 199996730 4474 34409780
chr1 200001205 200001216 EBF1 JASPAR yes 199996730 4475 34409781
chr1 200001267 200001272 GATA2 JASPAR yes 199996730 4537 34409782
chr1 200001284 200001299 STAT2 JASPAR yes 199996730 4554 34409783
chr1 200001285 200001299 STAT1 JASPAR yes 199996730 4555 34409784
chr1 200001291 200001301 ETV6 JASPAR yes 199996730 4561 34409785
chr1 200001291 200001304 ELF1 JASPAR yes 199996730 4561 34409786
chr1 200001292 200001299 SPI1 JASPAR yes 199996730 4562 34409787
chr1 200001292 200001300 EHF JASPAR yes 199996730 4562 34409788
chr1 200001297 200001311 PAX6 JASPAR yes 199996730 4567 34409789
chr1 200001321 200001336 STAT1 JASPAR yes 199996730 4591 34409790
chr1 200001323 200001334 STAT1 JASPAR yes 199996730 4593 34409791
chr1 200001323 200001334 STAT3 JASPAR yes 199996730 4593 34409792
chr1 200001326 200001336 NFATC3 JASPAR yes 199996730 4596 34409793
chr1 200001328 200001335 NFATC2 JASPAR yes 199996730 4598 34409794
chr1 200001329 200001340 NFKB1 JASPAR yes 199996730 4599 34409795
chr1 200001338 200001343 MYC TRANSFAC yes 199996730 4608 34409796
chr1 200001345 200001356 STAT1 JASPAR yes 199996730 4615 34409797
chr1 200001349 200001354 ETS2 TRANSFAC yes 199996730 4619 34409798
chr1 200001360 200001378 ESR2 JASPAR yes 199996730 4630 34409799
chr1 200001361 200001379 ESR2 JASPAR yes 199996730 4631 34409800
chr1 200001362 200001377 ESR2 JASPAR yes 199996730 4632 34409801
chr1 200001362 200001382 ESR1 JASPAR yes 199996730 4632 34409802
chr1 200001363 200001367 LFA1 TRANSFAC yes 199996730 4633 34409803
chr1 200001372 200001383 EBF1 JASPAR yes 199996730 4642 34409804
chr1 200001376 200001381 TFAP2A TRANSFAC yes 199996730 4646 34409805
chr1 200001376 200001382 MZF1 JASPAR yes 199996730 4646 34409806
chr1 200001377 200001388 NFKB1 JASPAR yes 199996730 4647 34409807
chr1 200001380 200001394 PLAG1 JASPAR yes 199996730 4650 34409808
chr1 200001381 200001395 EBF1 JASPAR yes 199996730 4651 34409809
chr1 200001382 200001397 TFAP2A JASPAR yes 199996730 4652 34409810
chr1 200001382 200001397 TFAP2C JASPAR yes 199996730 4652 34409811
chr1 200001383 200001392 TFAP2A JASPAR yes 199996730 4653 34409812
chr1 200001383 200001394 EBF1 JASPAR yes 199996730 4653 34409813
chr1 200001387 200001392 TFAP2A TRANSFAC yes 199996730 4657 34409814
chr1 200001387 200001393 MZF1 JASPAR yes 199996730 4657 34409815
chr1 200001389 200001394 ETS2 TRANSFAC yes 199996730 4659 34409816
chr1 200001408 200001412 H1TF2 TRANSFAC yes 199996730 4678 34409817
chr1 200001408 200001412 NFE TRANSFAC yes 199996730 4678 34409818
chr1 200001408 200001412 SRF TRANSFAC yes 199996730 4678 34409819
chr1 200001412 200001423 ESRRB JASPAR yes 199996730 4682 34409820
chr1 200001424 200001438 PAX6 JASPAR yes 199996730 4694 34409821
chr1 200001442 200001452 MAX JASPAR yes 199996730 4712 34409822
chr1 200001446 200001461 STAT2 JASPAR yes 199996730 4716 34409823
chr1 200001496 200001507 STAT3 JASPAR yes 199996730 4766 34409824
chr1 200001501 200001506 ETS2 TRANSFAC yes 199996730 4771 34409825
chr1 200001513 200001533 RREB1 JASPAR yes 199996730 4783 34409826
chr1 200001519 200001534 RUNX2 JASPAR yes 199996730 4789 34409827
chr1 200001523 200001533 RUNX3 JASPAR yes 199996730 4793 34409828
chr1 200001531 200001537 GATA1 TRANSFAC yes 199996730 4801 34409829
chr1 200001534 200001541 NKX3-1 JASPAR yes 199996730 4804 34409830
chr1 200001548 200001552 YY1 TRANSFAC yes 199996730 4818 34409831
chr1 200001559 200001562 MYB TRANSFAC yes 199996730 4829 34409832
chr1 200001570 200001582 FOXI1 JASPAR yes 199996730 4840 34409833
chr1 200001577 200001580 MYB TRANSFAC yes 199996730 4847 34409834
chr1 200001600 200001609 NKX3-2 JASPAR yes 199996730 4870 34409835
chr1 200001617 200001625 GATA3 JASPAR yes 199996730 4887 34409836
chr1 200001628 200001640 TEF JASPAR yes 199996730 4898 34409837
chr1 200001628 200001643 SOX21 JASPAR yes 199996730 4898 34409838
chr1 200001628 200001644 SOX4 JASPAR yes 199996730 4898 34409839
chr1 200001630 200001641 PHOX2A JASPAR yes 199996730 4900 34409840
chr1 200001630 200001641 PROP1 JASPAR yes 199996730 4900 34409841
chr1 200001639 200001653 EBF1 JASPAR yes 199996730 4909 34409842
chr1 200001640 200001651 EBF1 JASPAR yes 199996730 4910 34409843
chr1 200001641 200001647 MZF1 JASPAR yes 199996730 4911 34409844
chr1 200001651 200001657 SOX10 JASPAR yes 199996730 4921 34409845
chr1 200001687 200001699 TEAD1 JASPAR yes 199996730 4957 34409846
chr1 200001722 200001733 DUX4 JASPAR yes 199996730 4992 34409847
chr1 200001725 200001746 IRF1 JASPAR yes 199996730 4995 34409848
chr1 200001729 200001741 IRF1 JASPAR yes 199996730 4999 34409849
chr1 200001729 200001743 IRF7 JASPAR yes 199996730 4999 34409850
SNPs associated with NR5A2[ENSG00000116833.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 200853257 rs145912392 T G 706705 Esophagus 0.0235848 850364
chr1 200772949 rs112332562 C T 626397 Heart 0.239439 850005
chr1 200001816 rs2737657 G A 0 Heart 0.0427759 844263
chr1 200043736 rs2816921 G A 0 Ovary 0.394563 844517
chr1 200656391 rs9427710 A G 509839 Thyroid 0.165911 849085
chr1 199919135 rs201822690 A AC 77595 Liver 0.131495 843856
chr1 200229160 rs113991094 A G 82608 Lung 0.294407 845770
Details of NR5A2[ENSG00000116833.9]
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Genomic Location chr1:199996730-200146552[+]
TSS 199996730
Gene Name NR5A2
Ensembl ID ENSG00000116833.9
ENTREZID 2494
Uniprot
F1D8R9
O00482
Protein Name
group A
Hepatocytic transcription factor hB1F-3
Liver nuclear receptor homolog-1 variant 2
Nuclear receptor NR5A2
Nuclear receptor subfamily 5
Nuclear receptor subfamily 5 group A member 2
Expression levels of NR5A2[ENSG00000116833.9]
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