EnhancerDB
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Enhancers that regulate RLF[ENSG00000117000.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 40548465 40552615 enh98448 40627045 74430
Uterus Lung (PC-9)
chr1 40561233 40561752 vista1284 40627045 65293
VISTA
chr1 40571305 40575515 enh11773 40627045 51530
Prostate (PC-3) Placenta Lung (PC-9) Epithelial (MCF-7)
chr1 40579625 40583775 enh267 40627045 43270
Blood (Karpas-422)
chr1 40594705 40600875 enh268 40627045 26170
Ovary Blood (Karpas-422) Lung (PC-9)
chr1 40603925 40609835 enh11774 40627045 17210
Prostate (PC-3) Placenta Cervix (HeLa-S3) Epithelial (MCF-7)
chr1 40606256 40606595 vista1285 40627045 20450
VISTA
chr1 40616285 40621795 enh269 40627045 5250
Blood (OCI-LY7) Blood (GM12878) Blood (Karpas-422) Lung (PC-9) Uterus
chr1 40628781 40629153 vista1286 40627045 1736
VISTA
chr1 40643885 40654534 enh270 40627045 16840
Bone Marrow (K562) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Blood (T-cell)
chr1 40683165 40687315 enh271 40627045 56120
Blood (Karpas-422)
chr1 40690005 40694155 enh49717 40627045 62960
Large Intestine
Transcript facotrs that regulate RLF[ENSG00000117000.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 40627684 40629235 ZNF274 GTRD no Blood (GM12878) 40627045 639 107802915
chr1 40628781 40628784 MYB TRANSFAC yes 40627045 1736 118276621
chr1 40628793 40628800 NKX3-1 JASPAR yes 40627045 1748 118276622
chr1 40628793 40628811 RARA JASPAR yes 40627045 1748 118276623
chr1 40628799 40628812 POU3F3 JASPAR yes 40627045 1754 118276624
chr1 40628803 40628818 HNF1A JASPAR yes 40627045 1758 118276625
chr1 40628804 40628814 ALX3 JASPAR yes 40627045 1759 118276626
chr1 40628804 40628814 HOXB2 JASPAR yes 40627045 1759 118276627
chr1 40628804 40628814 MNX1 JASPAR yes 40627045 1759 118276628
chr1 40628804 40628816 HNF1B JASPAR yes 40627045 1759 118276629
chr1 40628804 40628816 MEF2A JASPAR yes 40627045 1759 118276630
chr1 40628804 40628817 HNF1B JASPAR yes 40627045 1759 118276631
chr1 40628804 40628818 POU4F1 JASPAR yes 40627045 1759 118276632
chr1 40628804 40628820 POU4F2 JASPAR yes 40627045 1759 118276633
chr1 40628804 40628820 POU4F3 JASPAR yes 40627045 1759 118276634
chr1 40628805 40628813 LMX1A JASPAR yes 40627045 1760 118276635
chr1 40628805 40628813 LMX1B JASPAR yes 40627045 1760 118276636
chr1 40628805 40628813 NKX6-1 JASPAR yes 40627045 1760 118276637
chr1 40628805 40628813 NKX6-2 JASPAR yes 40627045 1760 118276638
chr1 40628805 40628813 VAX1 JASPAR yes 40627045 1760 118276639
chr1 40628805 40628813 VAX2 JASPAR yes 40627045 1760 118276640
chr1 40628805 40628813 VSX1 JASPAR yes 40627045 1760 118276641
chr1 40628805 40628813 VSX2 JASPAR yes 40627045 1760 118276642
chr1 40628810 40628814 TEAD2 TRANSFAC yes 40627045 1765 118276643
chr1 40628810 40628815 TBP TRANSFAC yes 40627045 1765 118276644
chr1 40628810 40628816 TMF TRANSFAC yes 40627045 1765 118276645
chr1 40628820 40628838 MAFF JASPAR yes 40627045 1775 118276646
chr1 40628822 40628837 MAFK JASPAR yes 40627045 1777 118276647
chr1 40628840 40628843 MYB TRANSFAC yes 40627045 1795 118276648
chr1 40628885 40628899 POU1F1 JASPAR yes 40627045 1840 118276649
chr1 40628889 40628903 JUN JASPAR yes 40627045 1844 118276650
chr1 40628891 40628902 BATF JASPAR yes 40627045 1846 118276651
chr1 40628892 40628903 FOSL2 JASPAR yes 40627045 1847 118276652
chr1 40628892 40628903 JUNB JASPAR yes 40627045 1847 118276653
chr1 40628893 40628904 FOS JASPAR yes 40627045 1848 118276654
chr1 40628893 40628904 FOSL1 JASPAR yes 40627045 1848 118276655
chr1 40628893 40628904 JUND JASPAR yes 40627045 1848 118276656
chr1 40628893 40628904 NFE2 JASPAR yes 40627045 1848 118276657
chr1 40628894 40628903 JDP2 JASPAR yes 40627045 1849 118276658
chr1 40628894 40628905 FOSL2 JASPAR yes 40627045 1849 118276659
chr1 40628894 40628905 JUNB JASPAR yes 40627045 1849 118276660
chr1 40628894 40628908 JUN JASPAR yes 40627045 1849 118276661
chr1 40628897 40628907 MAX JASPAR yes 40627045 1852 118276662
chr1 40628897 40628908 USF1 JASPAR yes 40627045 1852 118276663
chr1 40628897 40628908 USF2 JASPAR yes 40627045 1852 118276664
chr1 40628898 40628908 BHLHE40 JASPAR yes 40627045 1853 118276665
chr1 40628898 40628908 BHLHE41 JASPAR yes 40627045 1853 118276666
chr1 40628898 40628908 MLXIPL JASPAR yes 40627045 1853 118276667
chr1 40628898 40628908 MLX JASPAR yes 40627045 1853 118276668
chr1 40628898 40628908 SREBF2 JASPAR yes 40627045 1853 118276669
chr1 40628898 40628908 TFE3 JASPAR yes 40627045 1853 118276670
chr1 40628898 40628908 TFEB JASPAR yes 40627045 1853 118276671
chr1 40628900 40628905 MYC TRANSFAC yes 40627045 1855 118276672
chr1 40628900 40628905 USF1 TRANSFAC yes 40627045 1855 118276673
chr1 40628900 40628905 USF2 TRANSFAC yes 40627045 1855 118276674
chr1 40628905 40628926 ZNF263 JASPAR yes 40627045 1860 118276675
chr1 40628915 40628920 SP1 TRANSFAC yes 40627045 1870 118276676
chr1 40628917 40628922 TFAP2A TRANSFAC yes 40627045 1872 118276677
chr1 40628917 40628923 MZF1 JASPAR yes 40627045 1872 118276678
chr1 40628932 40628941 NFIX JASPAR yes 40627045 1887 118276679
chr1 40628932 40628942 NFIA JASPAR yes 40627045 1887 118276680
chr1 40628934 40628940 NFIC JASPAR yes 40627045 1889 118276681
chr1 40628947 40628952 NFY TRANSFAC yes 40627045 1902 118276682
chr1 40628957 40628973 ZNF143 JASPAR yes 40627045 1912 118276683
chr1 40628973 40628983 SP1 JASPAR yes 40627045 1928 118276684
chr1 40628973 40628994 ZNF263 JASPAR yes 40627045 1928 118276685
chr1 40628974 40628981 CEBPA TRANSFAC yes 40627045 1929 118276686
chr1 40628975 40628989 STAT1 JASPAR yes 40627045 1930 118276687
chr1 40628975 40628990 PRDM1 JASPAR yes 40627045 1930 118276688
chr1 40628975 40628990 STAT2 JASPAR yes 40627045 1930 118276689
chr1 40628976 40628986 MZF1 JASPAR yes 40627045 1931 118276690
chr1 40629010 40629021 FOXP2 JASPAR yes 40627045 1965 118276691
chr1 40629011 40629019 FOXO3 JASPAR yes 40627045 1966 118276692
chr1 40629015 40629025 MYF6 JASPAR yes 40627045 1970 118276693
chr1 40629041 40629055 PAX6 JASPAR yes 40627045 1996 118276694
chr1 40629081 40629092 DMRT3 JASPAR yes 40627045 2036 118276695
chr1 40629085 40629088 MYB TRANSFAC yes 40627045 2040 118276696
chr1 40629096 40629101 MYB TRANSFAC yes 40627045 2051 118276697
chr1 40629124 40629132 FOXL1 JASPAR yes 40627045 2079 118276698
chr1 40629138 40629146 FOXL1 JASPAR yes 40627045 2093 118276699
SNPs associated with RLF[ENSG00000117000.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 41248589 rs113176249 C T 541996 Esophagus 0.272296 256577
chr1 41326597 rs12140441 C T 620004 Esophagus 0.0410291 257154
chr1 40435157 rs41268047 A G 191888 Heart 0.254545 252230
chr1 39649923 rs79527973 T G 977122 Heart 0.384753 248056
chr1 41050952 rs4660438 G A 344359 Breast 0.0881479 255463
chr1 40801633 rs421650 A G 95040 Liver 0.337539 254413
chr1 41435372 rs112815259 C G 728779 Lung 0.296407 258741
chr1 41494222 rs11578697 G T 787629 Stomach 0.275859 258900
chr1 41365733 rs113564415 C A 659140 Adrenal 0.365608 257684
Details of RLF[ENSG00000117000.8]
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Genomic Location chr1:40627045-40706593[+]
TSS 40627045
Gene Name RLF
Ensembl ID ENSG00000117000.8
ENTREZID 6018
Uniprot
Q13129
Protein Name
Insulin-like 3
Zinc finger protein Rlf
Expression levels of RLF[ENSG00000117000.8]
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