EnhancerDB
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Enhancers that regulate SLC46A2[ENSG00000119457.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr9 115543965 115561635 enh10908 115653193 91558
Brain (SK-N-MC) Large Intestine Astrocyte Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Uterus
chr9 115568371 115575635 enh10909 115653193 77558
Bone Marrow (K562) Blood (OCI-LY7) Placenta Thyroid Blood (Karpas-422) Spleen Muscle (Myotube)
chr9 115580113 115587775 enh10910 115653193 65418
Bone (Osteoblast) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Stomach
chr9 115593465 115597615 enh25916 115653193 55578
Placenta
chr9 115604970 115611660 enh10911 115653193 41533
Prostate (PC-3) Bone (Osteoblast) Stomach Muscle (A673) Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr9 115605913 115605928 vista63033 115653193 47265
VISTA
chr9 115606684 115606763 vista63034 115653193 46430
VISTA
chr9 115614204 115614389 vista63035 115653193 38804
VISTA
chr9 115614224 115618875 enh95324 115653193 34318
Muscle (Myoblast) Bone (Osteoblast)
chr9 115618945 115628375 enh10912 115653193 24818
Lung Placenta Blood (Karpas-422) Heart Stomach
chr9 115624285 115624808 vista63036 115653193 28385
VISTA
chr9 115625683 115626114 vista63037 115653193 27079
VISTA
chr9 115641659 115648675 enh85509 115653193 4518
Prostate (PC-3) Bone (Osteoblast) Lung (PC-9) Epithelial (MCF-7)
chr9 115657106 115657497 vista63038 115653193 3913
VISTA
chr9 115659145 115663335 enh49537 115653193 5952
Prostate (PC-3) Thymus Epithelial (MCF-7)
chr9 115677625 115682215 enh25917 115653193 24432
Prostate (PC-3) Large Intestine Placenta Lung (PC-9) Epithelial (MCF-7)
chr9 115703593 115703826 vista63039 115653193 50400
VISTA
Transcript facotrs that regulate SLC46A2[ENSG00000119457.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr9 115648182 115648196 RORA JASPAR yes 115653193 4997 86403365
chr9 115648183 115648193 RORA JASPAR yes 115653193 5000 86403366
chr9 115648222 115648237 JUND JASPAR yes 115653193 4956 86403367
chr9 115648236 115648247 EBF1 JASPAR yes 115653193 4946 86403368
chr9 115648270 115648274 NFE TRANSFAC yes 115653193 4919 86403369
chr9 115648284 115648296 TEAD1 JASPAR yes 115653193 4897 86403370
chr9 115648303 115648308 H4TF1 TRANSFAC yes 115653193 4885 86403371
chr9 115648336 115648340 LFA1 TRANSFAC yes 115653193 4853 86403372
chr9 115648343 115648348 ETS2 TRANSFAC yes 115653193 4845 86403373
chr9 115648375 115648390 PRDM1 JASPAR yes 115653193 4803 86403374
chr9 115648430 115648434 H1TF2 TRANSFAC yes 115653193 4759 86403375
chr9 115648430 115648434 NFE TRANSFAC yes 115653193 4759 86403376
chr9 115648430 115648434 SRF TRANSFAC yes 115653193 4759 86403377
chr9 115648442 115648452 ALX3 JASPAR yes 115653193 4741 86403378
chr9 115648442 115648452 MEOX2 JASPAR yes 115653193 4741 86403379
chr9 115648442 115648452 MNX1 JASPAR yes 115653193 4741 86403380
chr9 115648442 115648454 MEF2A JASPAR yes 115653193 4739 86403381
chr9 115648443 115648451 LBX1 JASPAR yes 115653193 4742 86403382
chr9 115648443 115648451 PDX1 JASPAR yes 115653193 4742 86403383
chr9 115648443 115648451 VAX1 JASPAR yes 115653193 4742 86403384
chr9 115648443 115648451 VAX2 JASPAR yes 115653193 4742 86403385
chr9 115648443 115648451 VSX1 JASPAR yes 115653193 4742 86403386
chr9 115648443 115648451 VSX2 JASPAR yes 115653193 4742 86403387
chr9 115648443 115648453 MEF2A JASPAR yes 115653193 4740 86403388
chr9 115648446 115648460 SPIC JASPAR yes 115653193 4733 86403389
chr9 115648448 115648452 TEAD2 TRANSFAC yes 115653193 4741 86403390
chr9 115648448 115648460 EHF JASPAR yes 115653193 4733 86403391
chr9 115648448 115648461 ELF3 JASPAR yes 115653193 4732 86403392
chr9 115648449 115648460 ELF5 JASPAR yes 115653193 4733 86403393
chr9 115648451 115648456 ETS2 TRANSFAC yes 115653193 4737 86403394
chr9 115648451 115648459 FEV JASPAR yes 115653193 4734 86403395
chr9 115648452 115648459 SPI1 JASPAR yes 115653193 4734 86403396
chr9 115648467 115648479 POU2F1 JASPAR yes 115653193 4714 86403397
chr9 115648468 115648481 POU2F2 JASPAR yes 115653193 4712 86403398
chr9 115648469 115648478 POU5F1B JASPAR yes 115653193 4715 86403399
chr9 115648469 115648480 FOXB1 JASPAR yes 115653193 4713 86403400
chr9 115648484 115648488 TEAD2 TRANSFAC yes 115653193 4705 86403401
chr9 115648484 115648489 TBP TRANSFAC yes 115653193 4704 86403402
chr9 115648484 115648490 TFIID TRANSFAC yes 115653193 4703 86403403
chr9 115648492 115648498 NFIC JASPAR yes 115653193 4695 86403404
chr9 115648497 115648510 SMAD2 JASPAR yes 115653193 4683 86403405
chr9 115648507 115648525 ESR2 JASPAR yes 115653193 4668 86403406
chr9 115648512 115648522 EMX1 JASPAR yes 115653193 4671 86403407
chr9 115648512 115648522 EVX1 JASPAR yes 115653193 4671 86403408
chr9 115648512 115648522 EVX2 JASPAR yes 115653193 4671 86403409
chr9 115648517 115648527 RORA JASPAR yes 115653193 4666 86403410
chr9 115648536 115648553 BCL6B JASPAR yes 115653193 4640 86403411
chr9 115648553 115648569 E2F2 JASPAR yes 115653193 4624 86403412
chr9 115648560 115648576 SOX4 JASPAR yes 115653193 4617 86403413
chr9 115648563 115648567 YY1 TRANSFAC yes 115653193 4626 86403414
chr9 115648587 115648602 PRDM1 JASPAR yes 115653193 4591 86403415
chr9 115648596 115648602 SOX10 JASPAR yes 115653193 4591 86403416
chr9 115648624 115648640 POU4F2 JASPAR yes 115653193 4553 86403417
chr9 115648627 115648645 MAFF JASPAR yes 115653193 4548 86403418
chr9 115648629 115648644 MAFK JASPAR yes 115653193 4549 86403419
chr9 115648632 115648647 MEF2C JASPAR yes 115653193 4546 86403420
chr9 115648633 115648648 MEF2A JASPAR yes 115653193 4545 86403421
chr9 115648634 115648646 MEF2D JASPAR yes 115653193 4547 86403422
chr9 115648636 115648650 FOXF2 JASPAR yes 115653193 4543 86403423
chr9 115648636 115648650 ONECUT2 JASPAR yes 115653193 4543 86403424
chr9 115648636 115648650 ONECUT3 JASPAR yes 115653193 4543 86403425
chr9 115648637 115648651 POU4F1 JASPAR yes 115653193 4542 86403426
chr9 115648637 115648653 POU4F2 JASPAR yes 115653193 4540 86403427
chr9 115648637 115648653 POU4F3 JASPAR yes 115653193 4540 86403428
chr9 115648638 115648649 FOXB1 JASPAR yes 115653193 4544 86403429
chr9 115648638 115648649 FOXC1 JASPAR yes 115653193 4544 86403430
chr9 115648638 115648650 FOXC2 JASPAR yes 115653193 4543 86403431
chr9 115648638 115648654 POU4F2 JASPAR yes 115653193 4539 86403432
chr9 115648638 115648654 POU4F3 JASPAR yes 115653193 4539 86403433
chr9 115648640 115648654 POU4F1 JASPAR yes 115653193 4539 86403434
chr9 115648642 115648658 SOX8 JASPAR yes 115653193 4535 86403435
chr9 115648658 115648663 SP1 TRANSFAC yes 115653193 4530 86403436
chr9 115657118 115657130 GLI2 JASPAR yes 115653193 3925 95401884
chr9 115657118 115657130 ZBTB7B JASPAR yes 115653193 3925 95401885
chr9 115657118 115657130 ZBTB7C JASPAR yes 115653193 3925 95401886
chr9 115657135 115657139 YY1 TRANSFAC yes 115653193 3942 95401887
chr9 115657138 115657147 NKX2-8 JASPAR yes 115653193 3945 95401888
chr9 115657138 115657148 NKX2-3 JASPAR yes 115653193 3945 95401889
chr9 115657150 115657154 H1TF2 TRANSFAC yes 115653193 3957 95401890
chr9 115657150 115657154 NFE TRANSFAC yes 115653193 3957 95401891
chr9 115657150 115657154 SRF TRANSFAC yes 115653193 3957 95401892
chr9 115657156 115657174 MAFF JASPAR yes 115653193 3963 95401893
chr9 115657157 115657161 NFE TRANSFAC yes 115653193 3964 95401894
chr9 115657157 115657172 MAFK JASPAR yes 115653193 3964 95401895
chr9 115657199 115657210 ESRRA JASPAR yes 115653193 4006 95401896
chr9 115657199 115657210 ESRRB JASPAR yes 115653193 4006 95401897
chr9 115657200 115657208 NR4A2 JASPAR yes 115653193 4007 95401898
chr9 115657201 115657211 RORA JASPAR yes 115653193 4008 95401899
chr9 115657216 115657231 RUNX2 JASPAR yes 115653193 4023 95401900
chr9 115657219 115657230 RUNX1 JASPAR yes 115653193 4026 95401901
chr9 115657220 115657230 RUNX3 JASPAR yes 115653193 4027 95401902
chr9 115657221 115657230 RUNX2 JASPAR yes 115653193 4028 95401903
chr9 115657221 115657242 IRF1 JASPAR yes 115653193 4028 95401904
chr9 115657223 115657238 STAT2 JASPAR yes 115653193 4030 95401905
chr9 115657224 115657238 STAT1 JASPAR yes 115653193 4031 95401906
chr9 115657225 115657237 IRF1 JASPAR yes 115653193 4032 95401907
chr9 115657230 115657244 SPI1 JASPAR yes 115653193 4037 95401908
chr9 115657230 115657244 SPIC JASPAR yes 115653193 4037 95401909
chr9 115657234 115657240 MZF1 JASPAR yes 115653193 4041 95401910
chr9 115657238 115657242 YY1 TRANSFAC yes 115653193 4045 95401911
chr9 115657299 115657315 POU4F3 JASPAR yes 115653193 4106 95401912
chr9 115657301 115657315 ONECUT3 JASPAR yes 115653193 4108 95401913
chr9 115657301 115657316 HNF1A JASPAR yes 115653193 4108 95401914
chr9 115657302 115657316 POU4F1 JASPAR yes 115653193 4109 95401915
chr9 115657303 115657314 PHOX2A JASPAR yes 115653193 4110 95401916
chr9 115657303 115657314 PROP1 JASPAR yes 115653193 4110 95401917
chr9 115657303 115657319 POU4F3 JASPAR yes 115653193 4110 95401918
chr9 115657305 115657319 POU4F1 JASPAR yes 115653193 4112 95401919
chr9 115657305 115657320 HNF1A JASPAR yes 115653193 4112 95401920
chr9 115657308 115657318 PAX7 JASPAR yes 115653193 4115 95401921
chr9 115657313 115657321 HOXA5 JASPAR yes 115653193 4120 95401922
chr9 115657329 115657340 DMRT3 JASPAR yes 115653193 4136 95401923
chr9 115657366 115657377 E2F6 JASPAR yes 115653193 4173 95401924
chr9 115657380 115657393 JUN JASPAR yes 115653193 4187 95401925
chr9 115657381 115657394 ATF4 JASPAR yes 115653193 4188 95401926
chr9 115657399 115657410 RUNX1 JASPAR yes 115653193 4206 95401927
chr9 115657426 115657430 NFE TRANSFAC yes 115653193 4233 95401928
chr9 115657435 115657448 DUXA JASPAR yes 115653193 4242 95401929
chr9 115657435 115657453 MAFF JASPAR yes 115653193 4242 95401930
chr9 115657436 115657447 DUX4 JASPAR yes 115653193 4243 95401931
chr9 115657452 115657465 SMAD2 JASPAR yes 115653193 4259 95401932
chr9 115657458 115657477 PAX5 JASPAR yes 115653193 4265 95401933
chr9 115657468 115657479 ESRRA JASPAR yes 115653193 4275 95401934
chr9 115657468 115657479 ESRRB JASPAR yes 115653193 4275 95401935
chr9 115657482 115657491 SRY JASPAR yes 115653193 4289 95401936
SNPs associated with SLC46A2[ENSG00000119457.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr9 116113396 rs7873862 C T 460203 Heart 0.019423 11242825
chr9 114831393 rs71503504 C G 809807 Breast 0.290305 11236622
chr9 114726762 rs10981184 G A 914438 Ovary 0.317143 11235433
chr9 114738486 rs150488862 A T 902714 Uterus 0.258339 11235654
chr9 114836428 rs71503505 G A 804772 Liver 0.263291 11236697
Details of SLC46A2[ENSG00000119457.7]
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Genomic Location chr9:115641200-115653193[-]
TSS 115653193
Gene Name SLC46A2
Ensembl ID ENSG00000119457.7
ENTREZID 57864
Uniprot
Q9BY10
A0A024QYV1
Protein Name
Thymic stromal cotransporter homolog
Expression levels of SLC46A2[ENSG00000119457.7]
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