EnhancerDB
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Enhancers that regulate TCTN3[ENSG00000119977.16]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr10 97404045 97408255 enh50565 97453900 45645
Liver (HepG2) Large Intestine
chr10 97433225 97437923 enh50566 97453900 15977
Colon (HCT116) Liver (HepG2) Large Intestine Lung (PC-9)
chr10 97456975 97457361 vista8415 97453900 3075
VISTA
chr10 97476665 97483815 enh13425 97453900 22765
Placenta Lung (PC-9) Epithelial (MCF-7)
chr10 97486405 97491335 enh90844 97453900 32505
Bone Marrow (K562) Uterus
chr10 97498645 97505115 enh13426 97453900 44745
Brain (SK-N-MC) Astrocyte Blood (GM12878) Muscle (A673) Placenta Uterus Stomach
chr10 97512885 97520715 enh1434 97453900 58985
Placenta Peripheral Blood (MM.1S) Blood (Karpas-422)
chr10 97518502 97518757 vista8416 97453900 64602
VISTA
chr10 97521944 97522167 vista8417 97453900 68044
VISTA
chr10 97525698 97532557 enh60263 97453900 71798
Neural Stem Cells (H9) Blood (OCI-LY7) Blood (GM12878)
chr10 97527766 97528166 vista8418 97453900 73866
VISTA
chr10 97541505 97546495 enh86879 97453900 87605
Stomach Blood (GM12878)
chr10 97543464 97543877 vista8419 97453900 89564
VISTA
chr10 97545881 97546028 vista8420 97453900 91981
VISTA
chr10 97546705 97555655 enh13427 97453900 92805
Large Intestine Astrocyte Lung Stomach Placenta Uterus Thymus Heart
chr10 97547373 97547492 vista8421 97453900 93473
VISTA
Transcript facotrs that regulate TCTN3[ENSG00000119977.16]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr10 97450790 97464649 ZBTB33 GTRD no Lung (A549) 97453900 3110 107933326
chr10 97452101 97457832 ZNF274 GTRD no Blood (GM12878) 97453900 1799 107933327
chr10 97452187 97457481 ZNF274 GTRD no Blood (GM12878) 97453900 1713 107933328
chr10 97452697 97457612 ZNF274 GTRD no Liver (HepG2) 97453900 1203 107933329
chr10 97456459 97457286 ZNF274 GTRD no Blood (GM12878) 97453900 2559 107933330
chr10 97456719 97457666 ZNF274 GTRD no Bone Marrow (K562) 97453900 2819 107933331
chr10 97456954 97457690 ZBTB33 GTRD no Lung (A549) 97453900 3054 107933332
chr10 97456979 97456999 ESR1 JASPAR yes 97453900 3079 21138739
chr10 97456985 97456989 ESR1 TRANSFAC yes 97453900 3085 21138740
chr10 97457002 97457007 GATA2 JASPAR yes 97453900 3102 21138741
chr10 97457022 97457028 ZNF354C JASPAR yes 97453900 3122 21138742
chr10 97457024 97457029 GATA2 JASPAR yes 97453900 3124 21138743
chr10 97457039 97457049 MZF1 JASPAR yes 97453900 3139 21138744
chr10 97457045 97457065 RREB1 JASPAR yes 97453900 3145 21138745
chr10 97457049 97457069 RREB1 JASPAR yes 97453900 3149 21138746
chr10 97457051 97457071 RREB1 JASPAR yes 97453900 3151 21138747
chr10 97457053 97457074 ZNF263 JASPAR yes 97453900 3153 21138748
chr10 97457054 97457074 RREB1 JASPAR yes 97453900 3154 21138749
chr10 97457056 97457061 SP1 TRANSFAC yes 97453900 3156 21138750
chr10 97457057 97457067 ZNF740 JASPAR yes 97453900 3157 21138751
chr10 97457063 97457074 E2F1 JASPAR yes 97453900 3163 21138752
chr10 97457064 97457075 E2F4 JASPAR yes 97453900 3164 21138753
chr10 97457064 97457075 E2F6 JASPAR yes 97453900 3164 21138754
chr10 97457065 97457070 SP1 TRANSFAC yes 97453900 3165 21138755
chr10 97457117 97457123 YY1 JASPAR yes 97453900 3217 21138756
chr10 97457122 97457712 ZNF274 GTRD no Blood (GM12878) 97453900 3222 107933333
chr10 97457129 97457133 YY1 TRANSFAC yes 97453900 3229 21138757
chr10 97457135 97457141 PEA3 TRANSFAC yes 97453900 3235 21138758
chr10 97457147 97457163 GLIS1 JASPAR yes 97453900 3247 21138759
chr10 97457148 97457162 GLIS2 JASPAR yes 97453900 3248 21138760
chr10 97457148 97457162 GLIS3 JASPAR yes 97453900 3248 21138761
chr10 97457153 97457171 TP63 JASPAR yes 97453900 3253 21138762
chr10 97457167 97457171 H4TF2 TRANSFAC yes 97453900 3267 21138763
chr10 97457209 97457213 YY1 TRANSFAC yes 97453900 3309 21138764
chr10 97457210 97457221 CEBPA JASPAR yes 97453900 3310 21138765
chr10 97457219 97457228 PITX3 JASPAR yes 97453900 3319 21138766
chr10 97457219 97457229 GSC2 JASPAR yes 97453900 3319 21138767
chr10 97457219 97457229 GSC JASPAR yes 97453900 3319 21138768
chr10 97457220 97457228 OTX1 JASPAR yes 97453900 3320 21138769
chr10 97457220 97457228 OTX2 JASPAR yes 97453900 3320 21138770
chr10 97457220 97457228 RHOXF1 JASPAR yes 97453900 3320 21138771
chr10 97457224 97457230 MZF1 JASPAR yes 97453900 3324 21138772
chr10 97457227 97457231 H1TF2 TRANSFAC yes 97453900 3327 21138773
chr10 97457227 97457231 NFE TRANSFAC yes 97453900 3327 21138774
chr10 97457227 97457231 SRF TRANSFAC yes 97453900 3327 21138775
chr10 97457233 97457489 SPI1 UCSC Txn Factor no Conserved 97453900 3333 107933334
chr10 97457233 97457489 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 97453900 3333 107933335
chr10 97457245 97457253 TBX15 JASPAR yes 97453900 3345 21138776
chr10 97457246 97457251 SP1 TRANSFAC yes 97453900 3346 21138777
chr10 97457263 97457276 DUXA JASPAR yes 97453900 3363 21138778
chr10 97457266 97457542 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 97453900 3366 107933336
chr10 97457279 97457549 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 97453900 3379 107933337
chr10 97457299 97457308 PITX3 JASPAR yes 97453900 3399 21138779
chr10 97457299 97457309 GSC JASPAR yes 97453900 3399 21138780
chr10 97457317 97457327 PAX3 JASPAR yes 97453900 3417 21138781
chr10 97457317 97457327 PAX7 JASPAR yes 97453900 3417 21138782
chr10 97457320 97457328 RHOXF1 JASPAR yes 97453900 3420 21138783
chr10 97457320 97457329 PITX3 JASPAR yes 97453900 3420 21138784
chr10 97457342 97457349 SPIB JASPAR yes 97453900 3442 21138785
SNPs associated with TCTN3[ENSG00000119977.16], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr10 97453703 rs41291572 A C 0 Esophagus 2.5312e-11 1595944
chr10 97453703 rs41291572 A C 0 Esophagus 3.75689e-05 1595944
chr10 97459616 rs7097074 T C 5716 Heart 5.4458e-08 1596005
chr10 97526607 rs7097489 G A 72707 Pancreas 0.0741039 1596331
chr10 97040225 rs45458497 T C 382933 Uterus 0.010198 1592909
chr10 97464508 rs4917702 A G 10608 Thyroid 9.11296e-06 1596058
chr10 97454889 rs11188437 G A 989 Liver 0.00781518 1595968
Details of TCTN3[ENSG00000119977.16]
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Genomic Location chr10:97423158-97453900[-]
TSS 97453900
Gene Name TCTN3
Ensembl ID ENSG00000119977.16
ENTREZID 26123
Uniprot
Q6NUS6
Protein Name
Chromosome 10 open reading frame 61
Tectonic-3
Expression levels of TCTN3[ENSG00000119977.16]
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